Serratia symbiotica: SCc_133
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Entry
SCc_133 CDS
T01672
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ssz
Serratia symbiotica
Pathway
ssz00300
Lysine biosynthesis
ssz00550
Peptidoglycan biosynthesis
ssz01100
Metabolic pathways
ssz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCc_133 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCc_133 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCc_133 (murF)
Enzymes [BR:
ssz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SCc_133 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CRS1_YhbY
Lipase_GDSL_2
YtfJ_HI0045
Motif
Other DBs
NCBI-ProteinID:
AEW44314
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Position
239531..240901
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AA seq
456 aa
AA seq
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MIPVSLLSLSKILSAELIGADSKIIEVTTDARKVTLDCLFVALKGKRFDAHNFAIDAVVG
GAKALLVSQRLALDIPQLVVADTRVALGQLAAWVRQQLPARVAVLTGSSGKTSVKEMAAA
ILSECGEVLYTAGNFNNDIGVPLTLLRLQPQHNFAVIELGANHIGEIAYTSALTRPYTTA
LVNNLSAAHLEGFGSFVGVAQAKGEIFIGLQDNGIAIINADNNNWPHWRYMLNDKTVWFF
SSLGITGVEFFASNIRGNGSQFRLHSPLGCIEITLPLLGIHNVANVLAASAIAISMGASL
KAVRQGLRKLQPVLGRLFPIALSRNKLLLDDTYNANVGSMIASIQVLAHMPGYRVMVVSN
MEELGEEAQECHYQVGKVVRQASIDKVISFGSLSRVLSAASGSGEHYEDKADVIARVAEC
LAEHEVITVLIKGSRRAAMEHIVYALQEKYDVSVVS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgtttctcttctatcattatctaaaatcttaagtgctgaattaattggtgct
gatagcaaaattattgaggtcacaacagatgcccgtaaagtaacattagattgcttattt
gtagcattaaagggtaaacgtttcgatgcacataattttgctattgatgcggttgtaggt
ggtgcaaaagcgttactagtcagtcaacgtttggcgctagatataccacaattagtggtt
gcggatacccgcgtagccttggggcaattggctgcctgggtacgtcagcagctaccagca
cgcgtggcggtactaaccggatcttctggtaaaacatcagtaaaggaaatggctgctgct
attcttagtgagtgtggtgaggtgttgtataccgctggtaattttaataatgacattggt
gtaccactgacgcttttgcgtctgcaaccacagcataattttgcggttattgaacttggc
gctaatcatattggtgaaattgcttatactagcgctttaactcgcccgtatactactgct
ttagtaaataacttatcagctgctcatttagagggttttggctcatttgttggggttgcg
caggcaaaaggggaaattttcattgggctgcaagataatggtattgcaattattaatgct
gacaacaataactggccgcactggcggtatatgctaaatgataaaactgtttggtttttt
tcatcactaggtattacaggggtagagtttttcgctagcaatattagaggtaatggtagt
cagttccgattacatagccctttaggttgcatcgaaatcacgttgccattacttggtatt
cataatgtagctaatgtcttagcagcgtcagctatcgctatatcgatgggtgcttcattg
aaagcagtccgtcaggggttaagaaagttacagcccgttctagggcgtttgtttccaatc
gcattatctagaaataagctattattagatgacacgtataacgctaatgttgggtctatg
atcgctagtatacaggtattagctcatatgcctggttatcgtgtaatggtggtaagtaat
atggaggagctgggagaagaggcacaagaatgtcattatcaggttggcaaagtagtccgg
caggctagtattgataaggtgattagttttggtagtttaagtagggtattgagcgctgcg
tctggtagcggagaacattatgaggataaggcagatgtgattgcgcgcgtagcagaatgc
cttgctgagcatgaggtaattactgtgttaataaaaggttcacgtcgtgctgccatggag
catatagtttatgcattacaggagaaatacgatgttagtgtggttagctga
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