Serratia symbiotica: SCc_256
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Entry
SCc_256 CDS
T01672
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ssz
Serratia symbiotica
Pathway
ssz00550
Peptidoglycan biosynthesis
ssz01100
Metabolic pathways
ssz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCc_256 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCc_256 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssz01011
]
SCc_256 (mrdA)
Enzymes [BR:
ssz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SCc_256 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCc_256 (mrdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AEW44424
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All DBs
Position
complement(517701..519575)
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AA seq
624 aa
AA seq
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MKIKHNPFRDYTAEHALFIRRTLVALLVILALSVILITNQYYLQIIHFKDYRTRSNKNHI
KLVPIAPSRGVIYDRKGIPLAINRTIYQLELIPGKVNNLNDTLQALREVVDLTDNDIIHF
EEIRKHSRCFVSIPVKLALNEVQIARFAINQFRFPGVEMRGYQRRYYPYGSTLTHVIGYV
SKINDRDIKELNKNSKLDNYAATRDIGKLGIERYYENTLHGKTGYKEVEVNNRGRMIRQL
HERLPTAGQDVYLTLDLNLQQYIERLLVGSRAAVVVSNPQTGSILAMVSNPSYDANLFVD
GISNKKYQMLLNDPNRPLMNRATQGLYPPASTVKPYIAVSALSAGVITKNTIIFDPGWWQ
LPGLKKRFHDWKKSGHGYLNITKALEESADTFFYQLAYDMGIDRLSSWLTKFGYGQYTGI
DLYEERSGLMPTRDWKIKRYKKPWYQGDTISVGIGQGYWTATPIQMSKALNTLINNGHIK
TPHLLQSTKGNEVLVEFHQTDNMKISDVDPNCWEITKDGMYGVANRPNGTARHYFVDAPY
HAAAKSGTAQVFGYATYNTHKIEEHLRDHKLMTAFAPYDHPTVSVAIILENGGAGTAAGT
ITRQILDYILLDNSDNHILPNRTS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaacataatccttttcgcgactatacagctgaacacgccctatttatacgc
cgtactttagtggcgttattagttatccttgcactgagtgtcatcctgatcactaatcaa
tattatctacaaattattcattttaaggattaccgtacccgctctaataaaaaccatatt
aagttagtacctattgcacccagccgtggtgttatatatgaccgtaaaggcattccacta
gcaattaatcgtacgatttatcaattagagctcattcccggtaaagtgaataatcttaat
gacactttgcaagcactacgtgaggtggtagatttaacagataatgatattattcatttt
gaagaaatacgtaaacattcacgatgctttgtatcaatccccgtgaaattagcgctcaat
gaagtacaaattgctcgctttgcaattaatcagtttcgttttccaggcgtggaaatgagg
ggataccaacgacgctactacccttatggctctaccctaacccatgttattggctacgta
tcaaagattaatgatcgtgatatcaaagaattaaataaaaacagtaaacttgataattac
gccgctactcgtgatatcggtaaattaggcattgagcgctattatgaaaatacattacat
ggtaaaactggttataaagaggtagaagtaaataaccgtggtagaatgattcgccaacta
cacgaacgactacctactgccggtcaagatgtatacttaacgttagatttaaatcttcaa
cagtatattgaacggttactagttggtagccgagctgctgttgtagtgagtaatccacag
actgggagcatcctagcaatggtttctaaccctagctatgatgcaaacttatttgttgat
ggcatttctaacaaaaaatatcaaatgcttcttaacgacccaaatagaccgctaatgaat
cgtgctactcagggattatacccgccagcttcaacggtaaaaccttacattgccgtttca
gcgctcagcgctggggttataactaaaaatactattattttcgatcctggttggtggcaa
ttgccagggctaaaaaaacgattccatgactggaagaaatcgggtcatggttacctaaat
attactaaagcactggaagaatccgcagatactttcttctatcaattagcttacgatatg
ggtatcgatcggctatcgagctggttaactaaatttggttacggacaatataccggcatc
gatctatatgaagagcgttccggattaatgccaacccgtgactggaaaatcaaacgttat
aaaaaaccatggtatcaaggtgataccatttcagttggcataggccaaggatactggact
gccaccccaatccaaatgtctaaggcgcttaatactctaattaataatggccacattaaa
acaccgcatctgctacaaagtactaaaggtaacgaggtgttagtagaattccatcagaca
gataacatgaagattagtgatgttgaccctaactgctgggagattactaaagatggtatg
tatggcgttgctaatcgccctaacggtactgcacgtcattattttgtagacgctccttat
catgctgctgcaaaatctggtacagcgcaggtatttggctacgccacctacaatactcat
aaaatagaagaacaccttcgtgatcataagcttatgactgcttttgcaccgtacgatcat
cctacagtatcagtggccatcattttagaaaatggtggagccggaaccgctgctggaacc
attactcgtcaaattcttgattatatcctattggataatagtgataatcatatactaccc
aatagaacttcatga
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