Serratia symbiotica: SCc_276
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Entry
SCc_276 CDS
T01672
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ssz
Serratia symbiotica
Pathway
ssz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCc_276 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssz03019
]
SCc_276 (pcnB)
Enzymes [BR:
ssz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SCc_276 (pcnB)
Messenger RNA biogenesis [BR:
ssz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SCc_276 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEW44440
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All DBs
Position
complement(552135..553691)
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AA seq
518 aa
AA seq
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MRCIIFIRVANFWRKALICDDKLTCDNTPVKNKNLSCRNGEATKKLIAIFKLSAYHNSEK
ASAYSITMHELRLFHTTHITNPITAKISHIQRLISHKDISDNALKVLYRLNKSGYESYLV
GGSVRDLLLGKKPKDFDITTNATPEQIRNLFRNCRLVGRRFRLAHIMFGPEIIEVATFRG
HHEQNSQSDKNSSLLAQNGMLLRDNIFGSIEEDAQRRDFTINSLYYNVADFRLRDYVDGL
RDLQQGVIRLIGNPETRYREDPVRMLRAVRFAANLNMQISDETAEPIPQLASLLYEIPPA
RLFDESIKLLLTGYGYPAYLKLCKYQLFQLLFPIIARYCTPDNTTLLEATLVQTLKNIDH
HLQNSIKVTPAFLFASLLWRPLLKYAQELALKNSLSYYEAFTIAINDVLDEQCCVLAIPK
RITTLIRDIWQLQLRLTRRKNKNVYKLMEHPQFSAAYDLLTIRAKVESNQETLHLAKWWG
EFQLRAPMLQKEMVNNLNAKLTLQRIYTRNRLPNKKGL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtattatttttatccgagtagccaatttttggcgtaaggcactcatctgcgat
gacaaactgacctgtgataacactccagtcaaaaataaaaacctatcctgcaggaatggc
gaggctacaaaaaagctaatcgcaatatttaaactttctgcttatcataatagcgaaaag
gcttctgcctatagtattactatgcatgaacttagattgtttcacactacgcatatcacc
aaccctattaccgctaaaatatcacacatacaacgcttgatctcacataaagatattagt
gataacgcactaaaagtgctataccgtttaaataaatcagggtatgagtcttatctggtg
ggtggtagtgtacgtgaccttttattagggaaaaaaccaaaagatttcgacatcactacc
aatgccacaccagaacagatacgtaacctttttcgcaattgtcgcctagtaggccgtcgt
tttcgtttagcacatattatgtttggaccggaaatcattgaagttgctacttttcgtgga
caccatgagcaaaactcacaatctgataaaaattcttcattactagcacaaaatggcatg
ctactacgagataatatatttggctcaatcgaagaggatgcgcaacgtcgtgattttact
attaatagcctatactataacgtggctgattttagattgcgcgattacgttgatggtcta
agggatttacaacaaggagttattcgccttatcggtaatccagaaactcgctaccgtgag
gacccagtacgcatgctacgtgcggtacgatttgcagctaatctgaatatgcaaattagc
gatgagactgcagaaccaatcccacaactagcctcactactatacgaaatacctcctgcg
cgtctatttgacgaatcaatcaagcttctgctcacaggatatggttatcctgcttactta
aagctatgtaaatatcaattattccagctactattccccataattgcacgctactgcaca
cctgataatacgacactactagaagctactttagtgcaaacactaaagaacattgatcat
cacttgcaaaacagcataaaagtaacgccggcatttttgtttgcctctctattatggcgt
ccactactaaaatacgcgcaagagttagcattaaaaaatagcctaagctattatgaagca
ttcacaatagcgataaatgatgtactagatgaacagtgttgtgtgctagccattccaaaa
cgcattactacactcattcgcgacatatggcagttacagctacgtttaacacgccgcaaa
aataaaaatgtgtataagctaatggagcacccacagtttagtgccgcctacgatctatta
acaattcgcgctaaagtagaaagtaatcaagaaacacttcacctagctaaatggtggggt
gaattccagctcagagcgcctatgctccagaaagagatggtaaataaccttaatgccaaa
ctaacactgcagcgtatatatacgcgcaatagattaccgaataaaaagggattataa
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