Serratia symbiotica: SCc_281
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Entry
SCc_281 CDS
T01672
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ssz
Serratia symbiotica
Pathway
ssz03030
DNA replication
ssz03430
Mismatch repair
ssz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCc_281 (holD)
03430 Mismatch repair
SCc_281 (holD)
03440 Homologous recombination
SCc_281 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssz03032
]
SCc_281 (holD)
03400 DNA repair and recombination proteins [BR:
ssz03400
]
SCc_281 (holD)
Enzymes [BR:
ssz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCc_281 (holD)
DNA replication proteins [BR:
ssz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCc_281 (holD)
DNA repair and recombination proteins [BR:
ssz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCc_281 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
AEW44444
LinkDB
All DBs
Position
566943..567377
Genome browser
AA seq
144 aa
AA seq
DB search
MRICMISRRDRLLEQLGIIQWVLRYADVLQGEVSVNLSPEIRLLIVAQLPPRIYDLLFCD
VLRSLGLTPAQTYGIRPRQVTMLPREDTNRNIWRMGIEEPLVAFGVQLYSPVLSELSQDP
QAKLALWQQICYNEKYFYSKSSCI
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttgcatgatatcaagacgtgaccgactattagaacaactaggtattatacag
tgggtgttacgttacgcagatgtattgcaaggtgaagtatcagtgaatttatcgcctgag
atacgtttattaattgtagcgcagttgcctccaagaatctatgacctgttgttttgtgat
gtgttacgtagtttagggttgacgccagcgcaaacctatggtataagaccgcgtcaagta
accatgctacctagagaagatactaatcgtaatatttggcgtatgggcatagaggagcca
cttgtagcatttggtgtacagctatatagcccagtactgtcagagctttctcaagatcca
caggctaaacttgcactttggcagcagatttgttataatgaaaagtatttttactctaag
agtagctgcatttaa
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