Serratia symbiotica: SCc_366
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Entry
SCc_366 CDS
T01672
Symbol
dnaX
Name
(GenBank) DNA polymerase III, g and t subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssz
Serratia symbiotica
Pathway
ssz03030
DNA replication
ssz03430
Mismatch repair
ssz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCc_366 (dnaX)
03430 Mismatch repair
SCc_366 (dnaX)
03440 Homologous recombination
SCc_366 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssz03032
]
SCc_366 (dnaX)
03400 DNA repair and recombination proteins [BR:
ssz03400
]
SCc_366 (dnaX)
Enzymes [BR:
ssz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCc_366 (dnaX)
DNA replication proteins [BR:
ssz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCc_366 (dnaX)
DNA repair and recombination proteins [BR:
ssz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCc_366 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_18
AAA_30
MAS20
TsaE
nSTAND3
PIF1
Sigma54_activ_2
AAA_assoc_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEW44518
LinkDB
All DBs
Position
complement(784501..786429)
Genome browser
AA seq
642 aa
AA seq
DB search
MSDQVLARKWRPQTFADVVGQGPVLTALTNSLALRRIHHAYLLSGTRGVGKTTIARLLAK
GLNCKASITAVPCGQCANCHDIGQGCFADLIEIDAASRTKVEDTRDLLDNVQYAPVRGRF
KVYLIDEIHMLSRHSFNALLKTLEEPPSHVKFILVTTEPHKLPITILSRCLQFHLKALDV
QEIRNQLKRILQKEKVPNDDIALQLLAYTANGSMRDALSLTDQAIVLGQGQITDASVKEM
LGTIDNNQPLTIIEALVDANGQRLMTQIAQSASQGVDWENLLVATLTLLHHIAMMQLLPT
MFNNQYASLECRIRKLARNVPPSDVQLYYQTLIIGRKELSYAPDRRMGIEMTLLRALAFH
PKVPITNQKNIPSQVIQPITTRQSQDTSSSLNQTDIVQNEKQLNLSNATTKLLKARTQLQ
QQEISTKKKNKTSTLKVTLQKNVTQKQLNTINKQLQKYYTEKIISGEQANPEAHYLHSLS
SLETASTIPTTPKTTYTTVGYEGNSALSIKIIIESIERDVWAGEIAKLKLPKLVEQLALN
TFKRQFQEGNICLHLRSIQCHLNSPSSQKILADALSELYSHLVKLTVVLDDNLAERTPLE
WRQIIYEEKLMFARQSIITDTHIQKLCRLFNTELDKDNIWPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaagtgcttgcacgtaagtggcgtcctcaaacatttgcagatgttgttgga
caaggaccagttcttactgcactgactaatagtcttgcgctaaggcgaatacatcatgcc
tatctgttatccggcacaaggggtgttggtaaaactacaattgcgcgcctattagctaaa
ggactaaattgtaaagccagcatcacagcggtgccatgtggccaatgtgctaactgccat
gatattgggcaaggatgttttgccgatctaattgagattgatgcggcctctagaacgaaa
gtagaggatactcgtgatctactcgataatgtccagtatgcacctgtgcgtggcagattc
aaagtctacctaatagatgaaatacatatgctttcacgtcacagttttaatgctttgtta
aaaacgctagaagagcctcctagtcacgttaaatttatattagtgaccaccgagccacat
aaattacctattactattctttcccgatgtttacaatttcatctcaaagcgctagatgtc
caagaaatccgtaatcaactaaaaaggatactacaaaaagagaaagtgcctaatgatgat
attgcattacaattattagcatatacagctaatggcagtatgcgagatgcgctaagttta
actgaccaagcaatagtcttaggacaagggcaaatcactgatgcatctgttaaagaaatg
ctaggaacaattgataataatcagccattaacaattattgaggcactagtagacgccaac
ggacaacgccttatgacgcaaattgcacaatctgcatcacaaggtgtggattgggaaaac
ctgctagtagcgacgctaacattattgcaccatattgcaatgatgcaattactacctaca
atgtttaataaccagtacgcatccctagaatgtagaatacgtaaactagcgcgtaatgtt
cctccctctgatgtacaactttattaccaaacactcataataggacgaaaggaactatcc
tacgccccagatcgtcgcatggggattgaaatgactttattacgggcactagcatttcat
cctaaagtaccaataacgaatcaaaaaaatataccttcgcaagtaatacagccaataaca
acgagacaatctcaagatacttcatcatcattgaaccaaactgatatagtgcaaaatgaa
aaacagctaaatttatctaatgcaaccactaaactattaaaagcacgtactcaactacag
caacaagaaatatccacaaaaaaaaagaataaaacctctacgttaaaagtaactctccaa
aaaaatgtaacacagaaacaattgaatactataaataaacaactgcaaaaatattataca
gaaaaaataatatcaggtgaacaagcaaatccagaagcccattacttacactcattgagt
agtcttgaaacagcatcaacgatcccaacaacacctaagacaacatacacaacggtaggg
tatgaaggaaattccgcactatcaattaaaataataattgaatctattgagcgcgatgtt
tgggctggagaaattgcgaaactcaaactgccgaaattagtggaacagttagcattaaat
acatttaaacgacaattccaggaaggcaatatttgtcttcacttaagatctatacaatgt
catctaaattcaccctcatcacagaaaattctagctgatgcgctaagcgagctatatagt
catttagttaaactaacagtcgtgctagatgataacctagcagaacggacgccactagaa
tggcgacaaataatttatgaagaaaaactaatgtttgcacgccaatctatcattacagat
actcatattcagaaactatgtcgcttatttaacacagaactagataaggataacatttgg
ccaatttaa
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