Serratia symbiotica: SCc_408
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Entry
SCc_408 CDS
T01672
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ssz
Serratia symbiotica
Pathway
ssz04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SCc_408 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssz03016
]
SCc_408 (trmU)
Enzymes [BR:
ssz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SCc_408 (trmU)
Transfer RNA biogenesis [BR:
ssz03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SCc_408 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
Asn_synthase
QueC
ATP_bind_3
DUF7411
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
AEW44558
LinkDB
All DBs
Position
complement(875508..876608)
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AA seq
366 aa
AA seq
DB search
MLDSNQKKVIIGISGGVDSSVAAYLLQQQGYQAIGLFMKNWEEDDNEEHCSAVTDLADAQ
AVCNKLGIKLHTVNFAAEYWDNVFELFLKEYQIGKTPNPDVLCNKEIKFKVFLEFATEAL
GADFIATGHYVRRQDINGKSYLLRGIDGSKDQSYFLYTLSHEQIARSLFPLGELKKTQVR
RIAEQLQLITANKKDSTGICFIGKRKFRDFLGRYLPNNPGLIVSVNGHIVGKHQGLMYHT
IGQRKGLGIGGIKGGEEGPWYVVEKDIDNNVLIVAQRHNHPRLMSIGLIAQKLHWVDRIK
RHNPFCCIVKTRYRQPDISCHITPLDNQRIAVRFEKAISAVTPGQSAVFYQGDICIGGGV
IEKCIM
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgttggacagcaaccagaaaaaagttatcattggtatttcaggtggtgttgattcttcc
gttgcagcctatttgttgcaacagcaagggtatcaagcaattggactatttatgaaaaat
tgggaagaagacgataacgaagaacactgttcagcggtgacagacttagccgatgcgcaa
gcagtatgtaataagctaggtataaagttacatacagttaattttgccgctgagtactgg
gataacgtatttgaattattcctcaaggaataccaaataggcaaaacgcctaacccagat
gtattatgtaataaagagattaaatttaaagtattcttagaatttgccaccgaagctcta
ggcgctgattttattgccactggccattatgtacgacgccaagacattaacggaaaaagc
tatttacttcgtggtattgacggtagtaaggatcaaagttacttcttatatactttaagt
catgagcaaatagcacgaagcttatttccactcggcgagttaaaaaaaacacaagtacgc
cgtattgcggaacaattgcagctaatcactgcaaataaaaaagactctactgggatatgt
tttattggtaaacgtaaatttcgcgattttttagggcgttatctaccaaataacccaggt
ttaattgttagcgtaaatggtcatatagtaggcaaacaccaaggactcatgtatcataca
ataggtcaacgtaagggactaggtattggtggtataaagggaggtgaagaggggccatgg
tatgtagtggaaaaagacatagataataatgttctaattgttgcgcagagacataatcat
ccgcgtttaatgtctattgggctaattgcgcaaaaattgcattgggttgatcgcataaaa
cgccataatccattttgctgtatagtaaaaacccgttatcgtcagcccgatatctcctgc
catatcaccccattagataatcaacgtatcgctgtaagattcgaaaaagcaatatctgct
gtaactccaggtcaatctgccgtattctatcaaggagatatatgtattggaggtggtgtt
attgagaaatgtataatgtaa
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