Serratia symbiotica: SCc_460
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Entry
SCc_460 CDS
T01672
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ssz
Serratia symbiotica
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssz03032
]
SCc_460 (gyrA)
03400 DNA repair and recombination proteins [BR:
ssz03400
]
SCc_460 (gyrA)
Enzymes [BR:
ssz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCc_460 (gyrA)
DNA replication proteins [BR:
ssz03032
]
Prokaryotic type
DNA Topoisomerases
SCc_460 (gyrA)
DNA repair and recombination proteins [BR:
ssz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCc_460 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
AEW44605
LinkDB
All DBs
Position
complement(1022359..1024899)
Genome browser
AA seq
846 aa
AA seq
DB search
MSDLARNITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSILGNDWN
KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQSFSLRYMLIDGQGNFGSVDGDSAAAM
RYTEVRMSRIAHEILVDLEKETVNFMPNYDGSEQIPSIMPARIPNLLINGASGIAVGMAT
NIPPHNLSEIINGCLAYINNEHISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YLRARAKVETDAKTRRETIVVGEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIIIEVKRDAVGDVVLNNLYTLTQLQVTFGINMVALHQDQPKLLNLKEILLSFVQHRRE
VVTRRTIFELRKARERAHILEALAIALVNINSIIDLIRLAPTLVEAKAALVGQGWELGAV
STILERIGSDAARPELLEAKFGICDGRYHLTMQQASAILEMRLQKLTCLEHEKLLNEYKE
LLHVITELISILENPDRLMNVICEELIAIKNQYSDKRLTEITDNMSDINIEDLINQEKVV
VTLSYQGYVKYQSLSSYEVQRRGGKGRSAARIKKEDFIDRLLVVNTHDTILCFSSLGRLY
WMKVYQLPEVSCAARGRPIVNLLPLEMNERITAILPVDNYEKGRYVFMATARGTVKKTAL
TDFSRPRSAGIIAVHLNAGDKLIGVDLTDGNNEVMLFSTSGKVVRFPENQVRSMGRTAIG
VRGINLGIGDSVISLIVPRASGDILTVTQNGFGKRTAITAYPTKSRATQGVISIKVSERN
GQVVGAVQVENIDQIMMITDAGTLVRTRVSEVSLVGRNTQGVRLIRTVEEENVVGLQRVA
DSVEDE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagaaacattacaccggtaaatattgaggaagagctaaaaaattcg
tatctggactatgcaatgtccgttattgttggacgtgcactgccagatgttcgtgatggg
ttaaaaccagttcaccgtcgcgtactatacgcgatgagtatactcggtaatgactggaat
aaaccatacaaaaaatcagctcgtatcgtcggagatgtgattgggaagtatcatccacac
ggcgatactgcagtttatgatacgattgtgcgtatggctcagtcattttcattacgttat
atgctaatagatggccagggtaattttggttccgttgatggcgactctgctgcggcaatg
cgttataccgaagtccgtatgtccaggattgctcacgagatattagtagatctagaaaaa
gaaacagttaattttatgcctaactacgatgggagcgaacagattccatctattatgcca
gcaagaatccctaatctattaattaatggggcatcgggcattgctgtaggcatggctacc
aatattccaccgcataatctgtcagaaataattaatggctgtctagcttatattaataat
gaacatattagtattgagggtttgatggaacatatcccaggccctgattttcctactgca
gcaattattaatggtcgtcgcggcattgaagaggcttatcgtactgggcgtggtaagatt
tatttgcgtgctcgtgcaaaagtagagacggatgctaaaactaggcgtgaaactattgtt
gttggtgagataccatatcaggttaataaggctcgtttgattgaaaagattgctgagcta
gtaaaagaaaagcgcgtagagggcattagtgctttgcgcgacgaatctgataaagatggt
atgcgtattataattgaagtaaaacgtgatgcagtaggtgatgtggtattaaataatcta
tatacgttaactcagttgcaggttacttttggtattaatatggtagctctgcaccaggat
cagccaaaattactaaatctaaaagagatcctgctatcttttgtccaacatcgtcgtgag
gtagtcacacgtcgtactatttttgaactacgtaaagctcgtgaacgcgctcatatttta
gaggcattggctattgcattggttaatattaattcaattattgatttaattcgccttgca
ccaactttggtagaggctaaggctgcattagtaggccagggttgggagctgggtgccgtg
agtacgatattagagcgtatcggtagtgatgcggctcgtccggagttgttggaggcaaaa
tttggtatctgtgatggcagatatcatctaacaatgcaacaggcctcagctattttggaa
atgcgtctgcaaaaattgacttgcttagagcatgaaaagttgcttaatgaatataaagag
ttgcttcacgtcattactgagctgatttctattctagaaaacccagatcgtcttatgaac
gtaatatgtgaagaattgattgcgatcaaaaaccagtacagtgataaacgtctcactgaa
ataactgataatatgtcagatattaatattgaagatttaattaaccaagaaaaggtggta
gtcacattatcatatcaaggttatgttaaataccagtccctatctagctatgaagttcaa
cgtcgtggtggtaaaggacgttctgctgcgcgcataaagaaagaagattttatcgatcgt
ctgctggtagttaatactcatgatactattctctgtttctctagtcttgggcggttgtat
tggatgaaggtatatcaactgcctgaagttagctgcgctgcacgtggtcgtccaatagta
aatttattgcccctagaaatgaatgagcgtattactgccatattaccggtagataattat
gaaaaagggcgctatgtgtttatggctacagcacgtggcactgtgaaaaaaactgcatta
actgattttagtcgtccgcgtagcgctggtattattgctgtgcatctcaatgcaggtgac
aaacttattggggtagatttaactgatggtaataatgaggtgatgctgttttctactagt
ggaaaagtagtgcgttttcctgaaaatcaagtgcgttctatgggacggactgctattggt
gtacgtggtatcaatttaggtataggtgatagtgttatctcattaattgttcctcgtgct
tcaggtgatatcttaactgtgactcagaatggttttggtaagcgtaccgcaattaccgca
tatccgactaaatcacgagctactcaaggagtgatttctattaaagtaagtgagcgtaat
ggacaagtagttggtgctgtgcaagtagaaaatattgatcagattatgatgattactgat
gcgggtacattagtgcgtacaagagtgtcagaggttagtttagtaggacgtaatacccag
ggtgtaaggttgatccggacggtggaagaagagaatgttgttggtctgcagcgcgtagct
gattcagtggaggacgaataa
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