KEGG   Serratia symbiotica: SCc_468
Entry
SCc_468           CDS       T01672                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ssz  Serratia symbiotica
Pathway
ssz00740  Riboflavin metabolism
ssz01100  Metabolic pathways
ssz01110  Biosynthesis of secondary metabolites
ssz01240  Biosynthesis of cofactors
ssz02024  Quorum sensing
Module
ssz_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ssz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SCc_468 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SCc_468 (ribD)
Enzymes [BR:ssz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SCc_468 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SCc_468 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AEW44613
LinkDB
Position
1037982..1039091
AA seq 369 aa
MHSDEFYMAHAFKLARLGRFTTAPNPNVGCVIVRNGVIVGEGYHLRAGEPHAEVHALNMA
KEKAQGATAYTTLEPCSHYGRTPPCTDALVAAGISRVVSAIQDPNPRVTGRGLQQLRKAK
IEVHYGLMSAEAEAINIGFLKRMRTGLPYVQLKLAISLDGRTAMASGQSQWISSSQARQD
VQYLRAQSASILSTSATILADNPALTVRWNELDTKIQNLYPQKNLRQPWRIILDSQNRVT
PQHRVVQQPGTTWLARLKPDKQVWPKNVEQLIFPAYNHGINLMTLMMQLAKRQVNSIWIE
AGPKLSGSLLQSGLVDELIVYIAPKLLGDHSRGLCHLTGVEQLADAPEFIFNNIKQVGPD
LRLKLSAKI
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcacagtgacgaattttatatggcacacgcttttaaattagcgcgcctaggtcgtttt
actacagctcctaatcccaatgttggttgtgttattgtgcgtaatggggtaatcgtcggt
gaagggtatcatttacgcgccggcgagccacacgcagaagtacatgcattaaatatggca
aaagaaaaagcacaaggtgcaactgcatataccacacttgaaccatgcagccattacgga
cgcacacctccgtgcactgatgcattagttgcagcaggtattagccgagtagttagcgct
atacaagatcctaatccgcgtgttacaggacgtggattacaacaattgcggaaggctaaa
atagaagtacactatggattaatgtcagctgaagctgaagcaataaatataggttttcta
aaacgtatgcgtactggattaccttatgtgcaacttaaacttgctatatcactagatggt
cgaacagcgatggcctcaggccaaagtcaatggatcagttcttctcaggctcgtcaagat
gtacagtatttgcgtgcacaaagcgcatcaatactcagtactagcgccaccatattggcg
gataatccagcactaacagtacgctggaatgaattagacactaaaatacaaaatctatat
ccgcaaaaaaatttgcgccaaccatggcgtattattctcgatagtcaaaatagagtaaca
ccccagcatcgcgtagtacaacaacctggaactacttggctagcacgtctaaaaccagat
aagcaggtttggccaaagaacgttgaacaattaatatttccagcatataatcatggtata
aatttaatgacgctaatgatgcaactagcgaaacgccaagttaactcaatatggattgaa
gcaggacctaaattatctgggtcactactccaatctggcttagtagatgagctaattgtg
tacatcgcaccaaaattattaggtgatcatagccgaggattatgtcatctaacaggtgtc
gagcaactagctgacgcacctgagtttatttttaataatataaaacaagtagggcctgat
ttaaggctaaagctcagcgctaaaatataa

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