Serratia symbiotica: SCc_511
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Entry
SCc_511 CDS
T01672
Symbol
msbA
Name
(GenBank) lipid transporter ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ssz
Serratia symbiotica
Pathway
ssz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCc_511 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssz02000
]
SCc_511 (msbA)
Enzymes [BR:
ssz01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SCc_511 (msbA)
Transporters [BR:
ssz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCc_511 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
Zeta_toxin
DEAD
AAA_16
ABC_membrane_2
nSTAND3
AAA_29
AAA_30
MMR_HSR1
AAA_15
SLFN-g3_helicase
APS_kinase
6PF2K
AAA_25
AAA_18
AAA_23
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEW44650
LinkDB
All DBs
Position
complement(1145451..1147226)
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AA seq
591 aa
AA seq
DB search
MFLGAGVCVMNDQNFSTWQTFRRLWPTIRPFRAGLVVASIALILNASSDAFMLSLLKPLL
DNGFGKTKDNILQWMPIAIIGLMVVRGTTSFISSYCISWVSGMVVMHMRRRLFGHMMRMP
IAFFDEQSTGTLLSRITYDSEQVASSSSRALVTMVRESASIIALFCMMFYYSWHLSVILI
ILSPIVSIAIRIVSKRFRDISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQQVETDRFNS
VSNRMRQQGMKLVSASSISDPIIQLIASLALAFVLYAASFPSIMETLTAGTITVVFSSMI
ALMRPLKSLTNVNSQFQRGMAACQTLFSILDMKQEKDVGTRKVVRAKGDIEFRNVTFYYP
SKEIPALRNINLSISEGKTVALVGRSGSGKSTIANLLTRFYDIQEGEILIDGYDLREYQL
ASLRDQVALVSQNVHLFNDTIANNIAYANEARYSREEIEKAASMAYTKDFIDKMENGLDT
VLGENGVTLSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQGALDELQRDRTS
LVIAHRLSTIEKADEILVIEEGRIIERGEHLTLLDEQGVYAQLYRLQFGQE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttccttggtgctggtgtatgcgtaatgaatgatcagaatttttctacttggcagaca
tttcgtcgcctatggccgacgattaggccttttagggctggtttggtcgtcgctagtata
gcattaattctcaatgcatctagcgatgcttttatgttgtctttgctaaaacctttatta
gataatggttttggaaaaactaaagataatattcttcaatggatgccaatagcgattatc
ggcttgatggtcgtgcgaggtactaccagctttatttccagttattgtatttcttgggtt
tctggcatggtggtaatgcatatgcgtcgacgtttatttggtcacatgatgagaatgccg
attgctttttttgatgagcagtcaactggaacattgttatcgcgtataacttatgattca
gagcaggtcgcatcatcatcttctcgtgcattagttactatggtacgtgaaagtgcatca
attatagcactattctgcatgatgttttattatagttggcatctttcagttatcttaata
atattatctcctattgtatcaattgcaattcgtattgtatctaagcggttccgtgatatt
agtaaaaacatgcaaaatactatgggtcaggtcacaactagcgctgaacaaatgctaaaa
gggcataaagaggtgctaatttttggtggccaacaagtcgaaactgatcgttttaactca
gttagcaatcgcatgcgccaacagggcatgaagttagtatctgcttcctctatttccgat
cccattattcaattaatagcttccttggctttagcttttgtattgtatgccgctagtttt
cctagtataatggaaacgcttactgctggtactatcactgtagttttctcttcgatgatt
gctttaatgcgtccgctgaaatcactaactaacgttaattcccagtttcagcgcggaatg
gcagcctgccaaactttgttctcaattttagatatgaagcaggagaaagatgtagggacc
cgtaaagtagtaagggctaaaggagatatagaatttcgcaatgtaaccttttattatcct
agtaaagaaataccggccctgcgcaatattaatttgagtatttcagaaggtaaaactgtt
gcattagtaggtcgttctggttcaggaaaatcaacaattgctaacttattgacccgtttt
tatgatattcaagaaggtgagatattaattgatgggtatgacttgcgtgaatatcaattg
gcgtctttacgtgatcaggttgcactggtttctcaaaatgttcacttatttaatgatact
atagctaataatatagcttatgcaaatgaagcacgctatagccgtgaggaaatagaaaaa
gcggcgagtatggcttacacaaaagattttattgataagatggagaatgggttagatact
gttcttggtgagaatggtgtaacgttatctggtggtcagcgtcagcgcattgctatcgcg
cgtgcattattgcgtgattgtccaatcttgattcttgacgaagctacttcggcattagac
actgagtctgaacgcgctattcaaggtgctttagatgaactacagagggatagaacttca
ttggttattgctcaccgtttatcaacaattgaaaaagcagatgaaattttagtaattgag
gaaggtcgtattattgaacgtggtgagcatttaactttgttagatgagcaaggtgtctac
gcgcaactgtatcgcttacaatttggtcaagaatga
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