Serratia symbiotica: SCc_551
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Entry
SCc_551 CDS
T01672
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ssz
Serratia symbiotica
Pathway
ssz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCc_551 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssz03400
]
SCc_551 (uvrB)
DNA repair and recombination proteins [BR:
ssz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCc_551 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCc_551 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
IF2_N
DUF7768
Motif
Other DBs
NCBI-ProteinID:
AEW44680
LinkDB
All DBs
Position
complement(1274093..1276108)
Genome browser
AA seq
671 aa
AA seq
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MSKIFKLYADFKPAGDQPIAIRKLEDGIKDGLAHQTLLGVTGSGKTFTIANVIANLNRPT
MVLAPNKTLAAQLYSEMKGFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEYIE
QIRLSTTKSLLERRDVVVVASVSAIYGLGDRELYLKMMLYLNRGMIINQRIILQRLAELQ
YIRHDQVLQRATFRVRGEVIDIFPAESDNLALRVELFDDEIERLSLFDPFTGKIQQIVPC
FTIYPKSHYVTSRAQMLEAMEQIKSELSERRKVLLDNNKLLEEHRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRSIGSPPPTLFDYLPSDSLLVVDESHVTIPQIRGMFKGDRARKVT
LVEYGFRLPSTLDNRPLCFEEFEAMAPQTLYVSATPGKYELDKSGVDLIDQVVRPTGLLD
PEVIVRSVTTQVDDLLSEIRKRVILKERVLVTTLTKRMAEDLTHYLEEHGELVRYLHSDI
DTVERIEIIRDLRLGKFNVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKVILYGDRVTESMAKAINETERRRIKQKAYNEEHGIVPQGLNKKISDILQWG
QQLSKRGICQSKSQISKNTTDDQSFTPAMLEHKIRKLEDQMYSHAQNLEFEEASLLRDEI
RHLRADFIVHA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatttttaaattgtatgcggattttaaaccagctggcgatcagccgatagca
attcgtaaacttgaggatgggataaaagatggcttagctcaccagacgttattgggggtt
accggttcaggaaaaacttttactattgctaatgtaatagctaacctaaatcgacccacc
atggtacttgctccgaacaagacgttggcagcacagctatatagtgagatgaaaggtttt
tttcctgaaaatgcagtagaatattttgtatcttactatgattattaccaaccagaagct
tatgtgcctagttctgatacttttatcgaaaaagatgcttcggtaaatgaatacatcgag
caaatacgactctctacaactaagtcattactagagcgccgtgatgttgtagttgtagct
tctgtttcagctatatatggtttaggagatcgagagttatatctcaagatgatgttatac
ttgaatagaggtatgatcattaatcagcgtattatactacagagattagcagaattacaa
tatatccgtcatgatcaggttttacagcgtgctactttccgcgtacgtggtgaggtgatt
gatattttcccagcggaatcagacaatttagcattgcgagttgagttattcgacgatgag
atagagcgattgtcgctatttgatccgtttactggtaaaattcaacaaatagtaccatgt
tttactatttatcctaagtcacactatgtaacctcacgtgctcagatgctagaagcaatg
gaacaaattaagtctgagttatctgagcgtcgtaaagttctattggataataacaagctc
ctagaagagcatcgattgagccaacgtactcagtttgatttagaaatgatgaatgaatta
ggttattgctcaggaattgaaaattattcacgttacttatctggtcgcagtatcgggtcg
ccgccacctactttatttgattatcttccgtctgatagcctgttagtagtggatgaatct
catgttactatccctcaaattcgtggcatgtttaaaggtgatcgtgcacgtaaagtaacc
cttgtagaatatggtttcaggttaccatctacgttagataatcgtcctttatgttttgaa
gagtttgaggcaatggcgccacagactctctatgtatctgcaacaccaggtaaatatgag
cttgataaatctggtgtagatcttattgatcaagtagtacgtcccacagggttattagat
ccagaagtgatagtgcgctcagttactactcaagtggatgatcttctttctgagattcgc
aaacgagtaatactcaaagagcgtgtgttagtaactacattaactaagcgcatggcagaa
gatttaactcactaccttgaggaacatggtgagcttgtacgctatctacattcagatatt
gatactgtagaacgtattgaaataattcgtgatttacgtttgggaaaatttaatgttttg
gttggtattaacttattacgtgagggtttagatataccagaagtatctttggtggctatt
ttggatgcggataaagaggggtttttgcgttctgagcgttcattaatacagactattggc
cgggcagcacgtaatctcaatggtaaggtgattttatatggtgatcgtgttaccgaatct
atggctaaagctattaatgaaactgaacgtcgacgtataaagcaaaaagcatataacgaa
gagcatggtattgttccacagggattaaataaaaaaattagtgatattttacaatggggt
cagcagcttagtaagcgaggtatatgtcagagtaaaagtcaaataagtaaaaatacaacg
gatgatcaaagtttcacaccagctatgttggagcacaaaattcgtaagttagaagatcag
atgtatagtcatgcgcaaaacttagagtttgaggaggcaagtttattacgtgatgaaata
cgtcacttgcgtgcagactttattgttcatgcatga
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