Serratia symbiotica: SCc_572
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Entry
SCc_572 CDS
T01672
Symbol
lpdA
Name
(GenBank) pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssz
Serratia symbiotica
Pathway
ssz00010
Glycolysis / Gluconeogenesis
ssz00020
Citrate cycle (TCA cycle)
ssz00260
Glycine, serine and threonine metabolism
ssz00280
Valine, leucine and isoleucine degradation
ssz00620
Pyruvate metabolism
ssz00630
Glyoxylate and dicarboxylate metabolism
ssz00640
Propanoate metabolism
ssz00670
One carbon pool by folate
ssz00785
Lipoic acid metabolism
ssz01100
Metabolic pathways
ssz01110
Biosynthesis of secondary metabolites
ssz01120
Microbial metabolism in diverse environments
ssz01200
Carbon metabolism
ssz01210
2-Oxocarboxylic acid metabolism
ssz01240
Biosynthesis of cofactors
Module
ssz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SCc_572 (lpdA)
00020 Citrate cycle (TCA cycle)
SCc_572 (lpdA)
00620 Pyruvate metabolism
SCc_572 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SCc_572 (lpdA)
00640 Propanoate metabolism
SCc_572 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SCc_572 (lpdA)
00280 Valine, leucine and isoleucine degradation
SCc_572 (lpdA)
00310 Lysine degradation
SCc_572 (lpdA)
00380 Tryptophan metabolism
SCc_572 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SCc_572 (lpdA)
00670 One carbon pool by folate
SCc_572 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssz04147
]
SCc_572 (lpdA)
Enzymes [BR:
ssz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SCc_572 (lpdA)
Exosome [BR:
ssz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SCc_572 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
AlaDh_PNT_C
FAD_binding_2
DAO
NAD_binding_8
HI0933_like
Thi4
FAD_binding_3
UDPG_MGDP_dh_N
GTP_cyclohydroI
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AEW44701
LinkDB
All DBs
Position
complement(1323974..1325401)
Genome browser
AA seq
475 aa
AA seq
DB search
MMSIEIKTHVVVLGAGPAGYSAAFRCADLGLETILVERYPTLGGVCLNVGCIPSKALLHI
AKVIKEAKALAPHGLLFSELKIDIDKVCIWKEKVIAQLANGLASLAKRRKVKIVNGVGRF
TGVNTLVVEREKDSTIIHFNNAIIAAGSRPMQLPFIPYADVRVWDSADALALRTIPDRLL
VMGGGIIGLEMSTVYHALGSQVDVVEMSDQLVPAIDKDVVKILTKHISKQFNLLLETKVI
ACEARAEGICVTMQGKKMPIESRCYDAVLVAIGRVPNGKLLHANKAGVNVNEHGFIEVDK
QLRTNVAHIFAVGDITRQPMLAHKGVHEGHIAAEVISGMKHYFDPKVIPSIAYTDPEVAW
VGLTEKEAKEQGIDYEISIFPWAASGRAIASACTDGMTKLIFDKVTHRILGGAIVGANGG
ELLGEISLAIEMGCDAEDIALTVHAHPTLYESIGLSAEIYKGSITDLLNSKADKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcattgaaattaaaactcatgtcgtagtattgggtgcaggaccagcaggatat
tctgctgcctttcgttgcgctgatttaggtcttgagactatattggtagagcgttatcct
actttaggtggggtgtgccttaacgtaggatgtattccttctaaagcattattgcatatt
gctaaggttattaaagaggctaaagcactagctccacatggtcttctgtttagtgagtta
aaaattgatatagataaagtttgtatctggaaagaaaaggtgattgctcagctagctaat
gggctagcgagccttgctaagaggagaaaagtaaaaatagtaaatggtgtaggtaggttt
actggtgttaatactctagttgttgaaagagaaaaagactcaacaattattcatttcaat
aacgctatcattgctgccggttctcgtccaatgcaattgccatttattccttatgcagat
gtgcgtgtatgggattctgctgatgcattagcattgagaacaattccagatcgtttgctg
gttatgggggggggtattatcggtctagaaatgagcacagtatatcatgcgcttggttca
caagttgatgtggttgaaatgagtgatcagcttgtccctgctatagataaggatgtagtt
aaaatcctcaccaaacacattagcaagcaatttaacttattgctagaaactaaagttatt
gcatgcgaggctagagcagaaggaatctgtgttactatgcaagggaaaaaaatgccaata
gagtcaagatgttacgatgcggtattagtggctataggtcgtgtaccaaatggtaagctg
ctgcatgctaataaagctggtgttaatgttaatgaacacggttttattgaggtggataag
cagttacgtactaatgtggcacatatctttgctgttggcgatattactaggcagccaatg
ttagcacataaaggtgtacatgaaggccatattgctgcagaggttatttccggaatgaag
cactactttgatccaaaagtaattccatctattgcttacactgatccagaagtagcttgg
gtaggtctaactgaaaaggaagcgaaagaacagggtattgactatgaaatatctatcttc
ccgtgggctgcgtcagggcgtgctattgcgtcagcttgtacagatggtatgactaaacta
atcttcgataaagtaacacaccgtatcttaggtggagctattgttggtgctaatgggggt
gagttattaggtgaaattagtctagctattgaaatgggatgtgatgctgaagatattgca
ttgactgttcatgcccatccaactctttacgaatctataggtctatcagcagagatctat
aaaggaagtattactgacctactaaactcgaaagcagataagaagtaa
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