Serratia symbiotica: SCc_623
Help
Entry
SCc_623 CDS
T01672
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ssz
Serratia symbiotica
Pathway
ssz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCc_623 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssz03400
]
SCc_623 (nfo)
Enzymes [BR:
ssz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SCc_623 (nfo)
DNA repair and recombination proteins [BR:
ssz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SCc_623 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF7108_C
Motif
Other DBs
NCBI-ProteinID:
AEW44750
LinkDB
All DBs
Position
complement(1447593..1448429)
Genome browser
AA seq
278 aa
AA seq
DB search
MKFIGAHVSALGGVSQAVIRAHQLNATAFALFIKNQRQWQASPLSTKEIDQFKNFCITYG
YSSSQILPHDSYLINLGHPCAEGLKKSRSAFLDEMQRCQQLGLKLLNLHPGSHLLQINID
KCLARISESINIVLDKTQYVTAVLENTAGQGSNLGFKFEHLAAIIHEVEDKSRVGICIDT
CHAFAAGYDLRTREDCNQTFKHLDDIIGFNYLRGMHLNDAKSGFNSRVDRHDCLGLGNIG
KTVFSYIMRDPRFDNIPLILETVNPDIWPQEIAWLKAH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattggtgcgcacgttagtgcgttaggtggtgtaagtcaagcagttatccgt
gctcatcaattaaatgcgactgcatttgctttgttcatcaaaaatcaacgtcagtggcaa
gcatctcctttgtctacaaaggagattgatcagtttaaaaatttctgtataacatatgga
tatagttcaagccagatcttgccgcatgatagttatctgattaatttgggtcatccgtgt
gctgaaggattaaaaaaatcaaggtctgcctttctagatgaaatgcagcgttgccaacaa
ctaggattaaagttgcttaatttgcaccctggtagtcacttgctacagattaatatagat
aaatgtttagcacgaattagtgaatcaattaatatcgtattagataaaactcaatatgta
acggcagttctagaaaacactgctggccaaggtagtaatttaggatttaaatttgagcat
ttagcagcaattattcatgaagttgaagataagagtcgggttggtatttgcatcgatacc
tgccatgcttttgcggctggttatgatctgcgtaccagggaggactgtaatcaaaccttt
aaacatttagatgatattattggttttaattatttgcgtggtatgcatttaaacgacgca
aaaagcggctttaacagtcgtgttgatcgccatgattgtttaggtttaggtaatattgga
aaaacagtatttagttatattatgcgtgatccacgctttgataatattccattaattttg
gaaacagtcaatcctgatatttggcctcaagaaattgcttggctaaaggcacattaa
DBGET
integrated database retrieval system
