Serratia symbiotica: SCc_690
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Entry
SCc_690 CDS
T01672
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ssz
Serratia symbiotica
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssz03021
]
SCc_690 (rpoH)
Transcription machinery [BR:
ssz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCc_690 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AEW44812
LinkDB
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Position
1562958..1563809
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AA seq
283 aa
AA seq
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MTKDIQTVALVPQGSLEAYIRAANNYPMLTAEEEQDLAQRLHYQGDLGAAKLLILAHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWLNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPAPDEEYSDSQSLAPLLYLQDKSSDFAENIEEDNWESNATDKLSCALECLDERSQHI
IRARWLDTENKSTLQALAEKYGVSAERVRQLEKNAIEKTKNSN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatattcaaactgtagctttagttcctcaaggaagcttagaagcttacatt
cgtgcagctaataactacccgatgctaactgcagaggaagaacaagatttagcgcaacgg
ctacattatcagggagatctaggggcagctaagcttcttattttggctcatctacgattc
gttgctcatattgctcgtaattattcaggctatggcttaccgcaagcagatctaatccag
gaaggtaatattggtctaatgaaagctgtgcggcgctttaatccagaggttggcgtacgt
ttggtctcctttgcggtacattggattaaagctgaaatacatgaatatgtactacgtaat
tggcgtattgttaaagtcgctactaccaaggcgcaacgaaaattattctttaacttacgc
aaaactaaacaacgccttggatggctcaaccaagatgaagtagaattagtagcacgtgag
ctaggcgtaacaagcaaagatgtacgagagatggaatctcgcatggcagcacaagatatg
acattcgatcctgctccagatgaggaatactctgatagccaatcactagcacccctgctt
taccttcaggataaaagctctgattttgccgaaaatattgaagaagataactgggaaagt
aatgctaccgataagttatcctgtgcactagaatgtttagatgagcgcagccagcacatt
attcgcgcccgttggttagataccgaaaacaaatctactctacaagcattagctgaaaaa
tatggtgtttctgctgaacgtgtgcgtcaacttgaaaaaaatgccatagaaaaaactaaa
aatagcaattga
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