Serratia symbiotica: SCc_754
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Entry
SCc_754 CDS
T01672
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssz
Serratia symbiotica
Brite
KEGG Orthology (KO) [BR:
ssz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssz03032
]
SCc_754 (gyrB)
03400 DNA repair and recombination proteins [BR:
ssz03400
]
SCc_754 (gyrB)
Enzymes [BR:
ssz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCc_754 (gyrB)
DNA replication proteins [BR:
ssz03032
]
Prokaryotic type
DNA Topoisomerases
SCc_754 (gyrB)
DNA repair and recombination proteins [BR:
ssz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCc_754 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
DUF6865
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEW44851
LinkDB
All DBs
Position
complement(1709218..1711638)
Genome browser
AA seq
806 aa
AA seq
DB search
MLMSNSYNSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCSE
IKVIIHIDNSVSVQDDGRGIPTDIHQEEGVSAAEVIMTMLHAGGKFDDNSYKVSGGLHGV
GISVVNALSEKLELVIRREGKLYQQTYVHGVPQEPLKVIGKTDYTGTTLRFWPSYQTFTH
VTKFEYDMLAKRLRELSFLNSGVCIRLNDQQTNRVDTFHYKGGIKAFVQYLNKNKTPIHL
NVFYFSAVKDNISVEVALQWNDSFQENIYCFTNNIPQRDGGTHLIGFRTAMTRTLNSYME
KEGYSKKSKISATGDDAREGLIAIVSVKVPDPKFSSQTKEKLVSSEVKAAVETLMNEKLV
DFLMENPGDAKIVIGKIIDAARAREAARKVREMTRRKGALDLAGLPGKLADCQEQNPALS
ELYLVEGDSAGGSAKQGRNRKSQAILPLKGKILNVEKARFDKMLSSQEVVTLITALGCGI
GPDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYVFIAQPPLYKVK
KGKENKYIKDDEEMDQYLISIAIDGAVLYTNAKASPLTGEQLEKLVTEYYSLQKLINRMS
RRYPSTLLNLLLYQPAISENDLYDSTKVKEWVDLLVRLLNDKEKCGSDYKSITLENRERQ
IFEPMLRVRTHGMDTDYLLDFDFVHSIEYRKICQLGEKLRNLIAEGAFIERGAHHQQIDS
FEQALEWLGKESRRGLSVQRYKGLGEMNPDQLWETTMDPENRCMLRMTIKDAIAADQLFT
TLMGDAVEPRRVFIEKNALKAGNIDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgtcgaattcttataattcctcaagtattaaggtattaaaagggctagatgca
gttcgtaagcgtccaggtatgtatattggcgatactgacgatggcactggtctacatcat
atggtgtttgaggttgtagataatgctatcgatgaagctctcgcaggttattgtagtgag
attaaggtaataattcatattgataattctgtttcggtacaggatgatggtcgaggtatt
cccactgatatacatcaagaggaaggagtttctgccgctgaagttattatgacaatgcta
catgctggaggaaaatttgatgataattcctataaagtttctgggggactgcatggggta
ggtatttcagtggtgaatgctttatcagagaaactagagctagtaattcgtcgtgaaggt
aagttgtatcagcaaacttatgtccatggagtgccgcaggaaccattaaaagttattgga
aaaactgattatactggaactacgctacgtttctggcctagctatcaaacttttacacac
gtcactaaatttgaatatgatatgctcgccaagcgacttcgagaactatcttttcttaat
tctggtgtatgtattcgtttaaacgatcaacaaaccaaccgtgtggatacatttcattat
aaaggcggtattaaagcttttgttcaatacttgaacaaaaataagacacctatccattta
aacgtgttttatttttctgcagtcaaagataatattagtgtagaggtagcattgcaatgg
aacgatagcttccaagaaaatatttattgttttactaataacatcccacaacgtgatggt
ggcacgcatttaattggcttccgaactgctatgacccgcacactaaatagttatatggaa
aaggaaggttatagtaaaaaatcgaagattagcgccactggtgatgatgcacgtgaggga
ttgatcgcaatagtttcggtgaaagtgccagatccaaaattttcttctcagactaaagag
aagctggtttcttcagaggttaaggctgctgttgaaacattaatgaacgagaagttagta
gactttctaatggaaaatcctggagatgcaaaaatagttattggaaaaattattgatgca
gcacgcgcccgtgaggcagcacgtaaagtacgtgaaatgactcgccgtaaaggtgctctt
gatttggcagggttacctggtaagttggctgattgtcaagaacaaaatccagcattatct
gagctatatctggtagagggagactctgcaggtggttcagctaaacaaggtagaaatcgt
aaaagtcaagcgatcctaccgcttaaaggtaaaatacttaatgttgaaaaagcacgtttt
gataagatgctttcttcgcaggaagtagtaacattaattactgccctgggatgcggtatt
ggtcctgatgaatataatccagacaagctacgttaccatagcattatcattatgactgat
gctgatgttgatggttcacatatccgtactttattactgacctttttttatcgtcagatg
ccagaaattattgaacgcggttatgtatttattgcccagccaccattgtataaggtaaaa
aagggtaaagaaaataaatatattaaagacgacgaggagatggatcagtacctaatatct
attgcaatagatggtgcagtcttgtatactaatgctaaagcgtcacctttgacaggtgag
caattagaaaaattagtaactgagtactatagtctacaaaagctaattaaccgtatgtca
cgtcgttatccaagtacattacttaatctattactataccaaccagctattagtgagaat
gatctgtatgactccactaaagtaaaggaatgggtagatttattagtgcgattattaaat
gataaagagaagtgcggtagcgattataagtctatcacacttgagaatcgtgaacgccaa
atctttgaaccaatgttgcgtgttcgtactcatggtatggatacagattacttgctggac
ttcgattttgttcatagtattgagtaccgtaaaatttgccaactcggtgaaaaattacgt
aatcttattgcagaaggtgcttttattgaacgcggcgcacatcatcaacagatagatagt
tttgagcaagcactggagtggctagggaaagaatcacgtcgtggtttatcagtacaacgt
tataaaggtctgggtgaaatgaatccagatcagttatgggaaactactatggacccagaa
aatcgttgcatgctacgtatgactattaaagatgctatcgctgctgatcagttatttact
actttaatgggggacgcagttgagccccgccgagtatttatagagaaaaatgcacttaaa
gcaggaaatattgacatttaa
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