Winmispira thermophila DSM 6192: STHERM_c02410
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Entry
STHERM_c02410 CDS
T01315
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sta
Winmispira thermophila DSM 6192
Pathway
sta03030
DNA replication
sta03410
Base excision repair
sta03420
Nucleotide excision repair
sta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STHERM_c02410
03410 Base excision repair
STHERM_c02410
03420 Nucleotide excision repair
STHERM_c02410
03440 Homologous recombination
STHERM_c02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sta03032
]
STHERM_c02410
03400 DNA repair and recombination proteins [BR:
sta03400
]
STHERM_c02410
Enzymes [BR:
sta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STHERM_c02410
DNA replication proteins [BR:
sta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
STHERM_c02410
DNA repair and recombination proteins [BR:
sta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
STHERM_c02410
NER (nucleotide excision repair)
GGR (global genome repair) factors
STHERM_c02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADN01215
UniProt:
E0RNU2
LinkDB
All DBs
Position
301476..304169
Genome browser
AA seq
897 aa
AA seq
DB search
MKPLFLIDAYGLIYRAYFALIRAPMRTKDGRNTSAIYGFFRMLFRFVKEYDPVYCGVVLD
SLTPTFREKTFEAYKATRQKTPEDLHPQIPVIEEILEALGFATVRMNGFEADDVMGTLAA
MAQAEGRPCFVVSGDKDLAQLVTKGVKIVRMDKDDFVVLDEEGVKEKWGVRADQIVDFLA
LVGDASDNIPGVEGIGEKTAQRLLAEYGSLEGVYAHLDELSPSLRRKLEEGRERAFLSRD
LATIRTDLDLSLTIGDLRRREPEVQRARELFLAYDIRSLAQEVGGSPSVGEKPTLEVEGP
SRAGVSYEVVTDRASLSRWVEEALERGAVAVDTETDGLDPLTCRLVGVSFAVDEGRACYV
PLAAPDVRPLPADVVREVLSPLLVSTEVVKVGQNLKFDYHVLRRWGVRPEGPFFDTMVAA
WLLESDAGRYNLDRLAEKYLGWRTIHYKDVVEKGASFETVPVAEAGVYAAEDADIALRLS
RVLKERLEAEGLGRVFYEMEMPLLSILARMEEWGIGLDGEALSAFGRELEERISTIEKEI
FELVGHEFNVGSTKQLQEVLFVERGLPPVKKTKTGFSTDTSVLEELAARDPVAAKVLEYR
SLTKLKNTYVDVLPGLVNPGTGRLHTWFSQVGTATGRLSSKDPNLQNIPIKTEEGRRIRE
AFVPQRGWWFLSADYSQIELVILAHLSEDPALCRAFREGEDVHRATGSLLFGVPPEAVTP
EQRRIAKTINFGVIYGMSAFRLSRELGIPRKEAERFIDAYFTTYAGVRAFIERTIAEAEE
KGYVTTLFGRKRPLPYITSRNKTQKTGAERIAVNTPIQGSGADIIKLAMIDLDAQMRRMG
LASRMILQVHDELIFEVPPEELEVMKRLVRERMEGVVRLSVPLRVEMGVGRNWGEAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgctcttcctcatagatgcctacggcctcatctatcgcgcctacttcgccctc
atccgggcccccatgcggaccaaggacgggcgcaacacgtccgcgatctacggtttcttc
cgtatgcttttcaggttcgtgaaggagtacgatccggtctactgcggagtggtgctcgat
tccctcacgcccaccttcagggagaagaccttcgaggcctacaaggccaccaggcagaag
acgccggaggatctccacccgcagatcccggtgatcgaggagatcctcgaggccttgggg
ttcgccaccgtccggatgaacgggttcgaggcggacgacgtgatgggtacgctcgccgcc
atggcccaggcggaggggcgtccgtgtttcgtggtatcgggcgacaaggacctcgcccag
ctggtcacgaagggcgtaaaaatcgtccggatggacaaggacgatttcgtggtgctcgac
gaggagggggtgaaggagaagtggggggtgcgggccgatcagatcgtggacttcctggcc
ctggtgggggatgcatccgacaacatcccgggtgtggaggggatcggtgagaagacggcc
cagcgactcctcgccgagtatgggtcgctcgagggagtctatgcccacctcgacgagctc
tccccttcgctgaggagaaagctcgaggagggaagggagcgggccttcctgagcagggat
ctcgccacgatacggacggatctcgatctctccctcacgataggggatctcaggcgcagg
gaacccgaggtacagcgggcgagggagctcttcctggcctacgacatacggagcctggct
caggaggtgggggggagtccttccgtgggggagaagccgaccctcgaggtggagggtccc
tccagggcgggtgtctcctacgaggtggtcaccgaccgggcctccctctcccgatgggtg
gaggaggccctggagaggggggcggtggccgtggacaccgagaccgatgggctcgacccc
ctcacgtgccgtctcgtgggtgtctcgttcgcggtggacgaggggcgggcgtgctacgtg
ccgctcgcggccccggatgtgcggccgcttcccgccgacgtggtacgcgaggtcctctca
ccgctcctcgtgtccaccgaggtggtgaaggtcgggcagaatctgaagttcgattaccac
gtgctcaggcggtggggcgtccgtccggaggggccgttcttcgacaccatggtggcggca
tggctgttggagtcggatgccgggcgctacaacctcgacaggctcgcggagaagtatctg
gggtggcgcaccatccattacaaggacgtggtggagaagggggcctcgttcgagacggtg
ccggtggcggaggcaggggtgtacgcggccgaggatgcggacatcgccttgcggctctcc
cgggtcttgaaggagcgtctcgaggccgaggggctcgggcgggtcttctacgagatggag
atgccgctcctctccatcctcgctcggatggaggagtgggggatcgggctcgacggggag
gccctgtcggccttcggcagggagctcgaggaacgcatctctaccatagagaaggagata
ttcgagctcgtcgggcacgagttcaacgtgggttccaccaagcagctccaggaggtgttg
ttcgtggagcgggggctgccgccggtgaagaagaccaagaccggtttttccacggacacg
agcgtgttggaggagctggccgctcgggatccggtggcggcgaaggtgctggagtaccga
agtctcaccaagttgaagaacacctatgtggacgtgcttcccgggctcgtgaacccgggg
acgggtcggcttcacacgtggttcagccaggtggggacggccacgggtcggctctcgagc
aaggatcccaacctccagaacatcccgatcaagaccgaggagggccgccggatcagggag
gcgttcgtgccgcagcggggctggtggttcctgagcgcggactactcccagatcgagctg
gtgatcctggcccatctttcggaggatccggctctctgcagggccttcagggagggcgag
gacgtacaccgggctacggggagtctcctcttcggggtaccgcccgaggcggtgacgccc
gagcagcggaggatcgccaagacgatcaactttggcgtgatctacgggatgtcggccttc
cggctctcgagggagctcggtatcccgcgtaaggaggccgaacggttcatcgatgcgtac
ttcaccacgtatgcgggggtgagggcgttcatcgaacggacgatcgccgaggcggaggag
aaggggtacgtgaccaccctcttcgggaggaagcggccgcttccctacatcacgagccgg
aacaagacgcagaagacaggagcggagcggatcgcggtgaacacgccgatccaggggtcg
ggagcggatatcatcaagctggcgatgatcgatctggacgcccagatgcgcaggatgggg
ctcgcctcccggatgatcctccaggtgcacgacgagctcatcttcgaggtgcctcccgag
gagcttgaggtgatgaagcggctggtgagggagcggatggagggggtggtgcggctctcg
gtgccgctccgggtggagatgggtgtggggaggaactggggagaggcccactag
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