Winmispira thermophila DSM 6192: STHERM_c05280
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Entry
STHERM_c05280 CDS
T01315
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
sta
Winmispira thermophila DSM 6192
Pathway
sta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STHERM_c05280 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sta03400
]
STHERM_c05280 (uvrB)
DNA repair and recombination proteins [BR:
sta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STHERM_c05280 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STHERM_c05280 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
HEM4
MshEN
P-loop_SecA
Kinesin
Microtub_bd
DUF87
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ADN01497
UniProt:
E0RQJ3
LinkDB
All DBs
Position
609380..611365
Genome browser
AA seq
661 aa
AA seq
DB search
MSGFRVEAPFGPAGDQGKAIALLSEGVKKGYRYQTLKGVTGSGKTFTMAKIVEEVQLPTL
VISHNKTLAAQLYREFKEFFPHNAVEYFVSYYDYYQPEAYVASKDLYIEKDASINEEIDR
LRLSATASLMERPDVIVVATVSCIYGLGNPEHFREMRVRIDVGQHLDLGMLKQQLVSLQY
ERNDAVLTRGTFRVRGEVVDIYPAYLEHVYRVELDWDEVVSIKVVHPLTLEVLDERKSLF
VYPAKHFVLPEEQIRSAIQGIREELEERYRELLSQNKLVEAQRLKARTEYDLEMLEEMGY
CSGIENYSRHLSGRKPGQRPAVLLDYFPDRFLVFIDESHVTLPQLKAMYEGDRSRKLSLV
EYGFRLPSALDNRPLRYEEFEAIVPQVIYVSATPEEEELSKSSQVVEQIIRPTGLLDPEV
EVRPTEGQIDDLYAEIRKRVEKGQRVLVTTLTKKMAEDLTDYLQSLGLRVRYLHAEVETI
ERVELLRDLRAGEFDVLVGINLLREGLDLPEVALVAILDADKIGFLRSATSLIQIMGRAA
RNAEGKVIMYADRVTDAMREAIEETRRRRTIQEAYNREHGITPQTIQKSVRDILERKMKV
KEEVERKEIEVLVHGYNILVPSERKKLIQRLEKEMLERAKNLEFEMAAVIRDEIARLKEM
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtttcagggtggaggccccgttcgggccagcgggtgatcaggggaaggcgatc
gccctcctgtcggagggggtgaagaagggctacaggtatcagacactcaaaggagtgacg
gggtccgggaagaccttcaccatggcgaagatcgtggaggaggtgcaactccccaccctg
gtgatctcccacaacaagaccctcgccgcccagctctaccgtgaattcaaggaattcttc
cctcacaacgccgtggagtacttcgtctcctactacgactactaccagcccgaggcctac
gtggcctccaaggatctctacatcgagaaggacgcctctattaacgaagagatcgacagg
ctcaggctctcggccaccgcgagtctcatggaacggcccgacgtcatcgtggtggcgacc
gtttcgtgcatctacggactgggaaatcccgagcacttcagggagatgcgcgtgaggatc
gatgtggggcagcacctcgatctggggatgctcaagcagcagctcgtgagcctccagtac
gagcgaaacgatgcggtgctcacgcgcggcaccttcagggtgcggggagaggtcgtggac
atctaccccgcctatctcgagcatgtctacagggtggaactcgactgggacgaagtggtc
tccataaaggtggtccatcccctcaccctggaggtgctcgacgagaggaagagccttttc
gtctatccggcgaagcacttcgtcctccccgaggagcagatccgtagtgccatccagggc
atccgggaggagcttgaggaacgttaccgggagctcctctcccagaacaagctcgtggag
gcccagcgcctcaaggcacggaccgagtacgacctcgagatgctcgaggagatgggctat
tgctccgggatagagaactactcgcgtcacctttccggccggaagccggggcagcgtccc
gcggtcttgctcgactacttccccgacaggttcctcgtcttcatcgacgagtcgcacgtg
accctaccccagctcaaggccatgtacgagggcgaccgctcgaggaagctctccctggtg
gagtacggcttcaggctcccttcggctcttgataacaggcccctcaggtacgaggagttc
gaggcgatcgtgccacaggtgatctatgtgtcggccacccccgaggaggaggaactctcc
aagtcatcccaggtggtggagcagatcatccgtcccaccgggctcctggacccggaggtg
gaggtgcgacccactgaagggcagatcgacgatctgtatgccgagatcaggaagcgggtc
gagaagggccagcgggtgctggtgaccaccctcaccaagaagatggccgaggatctcacc
gactacctgcagtccctggggctcagggtgcggtacctccatgccgaggtggagaccata
gagcgggtggagctcctgcgcgacctgcgggcaggcgagttcgacgtactggtggggatc
aacctcctccgggaggggctcgatcttcctgaggtggcgctggttgcgatcctcgatgcc
gacaagatagggtttctgcggtcggcgacctcgctcatccagatcatgggtcgggcggcg
aggaacgccgagggcaaggtcatcatgtacgccgatcgggtgaccgatgcgatgcgggag
gccatagaggagacgaggaggcgtcgaaccatccaggaggcctacaacagggaacacggc
atcaccccacagaccatccagaagtcggtgcgcgacatcctcgagcgcaagatgaaggtc
aaggaagaggtggaacggaaggagatcgaagtcttggtccacggatacaacatcctcgtc
ccctccgagcggaagaagctcatccagcgcctcgagaaggagatgctggagcgcgccaag
aacctggagttcgagatggccgcggtgatccgggacgagatcgcccgcctcaaggagatg
gcatga
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integrated database retrieval system
