Winmispira thermophila DSM 6192: STHERM_c07320
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Entry
STHERM_c07320 CDS
T01315
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sta
Winmispira thermophila DSM 6192
Pathway
sta02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
STHERM_c07320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sta03021
]
STHERM_c07320
Transcription machinery [BR:
sta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STHERM_c07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_10
HTH_Tnp_ISL3
HTH_DeoR
ATP-cone
HTH_23
PhyR_sigma-like
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ADN01689
UniProt:
E0RRI8
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All DBs
Position
816181..817026
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AA seq
281 aa
AA seq
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MSRKRVVKYSVGREEIAYLREIKRYKLLSPEEERELGKRIRRGDPEARERLITANLRLVV
KIALQFSVPDIPLLDLIQEGNIGLIRAAEKFDYRRNIRFSTYAAWWIRQAIHRALMNKRR
PIRLPNRKEDVLRKIEKAKQLLEQRLMREPSTEEIAELLGMETEEVEELINLGQEVVSLE
TQINDGSMDLHDVCPGGASPEEEVCRKACREDTLTLIQRTLDSRESEVVLHRYALTGPRY
TLKTLSEHLGISPETVRQIEIRALRKLRERAEVVGDYVLSR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaagagagtcgtgaagtacagcgtcggaagggaagagatagcctacctcagg
gagatcaagcgctataaactgctctctcccgaagaggagagggagctcggcaagcggata
cgccggggtgatcctgaagcacgggaacggctcatcaccgcaaacctcaggctcgtggtg
aagatcgcgctccagttctcggtacccgatatccccctcctcgatctcatacaggagggt
aacatcggcctcatccgggcggcggagaagttcgactatcggaggaacatccgcttctcc
acctatgcggcctggtggatacgacaggccatccacagggcgctcatgaacaagcggcgt
ccgatacggcttccgaaccgtaaggaggacgtgctccgcaagatagagaaggcgaaacag
ctcctcgagcagcgtctcatgagagaaccctccaccgaggagatcgccgagcttctcggc
atggagaccgaggaggtcgaagagctcatcaacctgggccaggaggtggtctccctggaa
acccagatcaacgacgggagcatggacctccatgatgtgtgtcccggtggtgcctctccc
gaagaagaggtgtgcaggaaggcctgcagggaggataccctcaccctcatacagcggacc
ctggattcccgggagagcgaagtggtcctccaccgctacgcgctcaccggacctcgctat
accctcaagacgttgagcgagcatctggggatctctcccgagaccgtgcggcagatagag
atccgtgccctccggaagttgagggagcgggccgaggtggtgggtgattacgtgctctct
cggtga
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