Winmispira thermophila DSM 6192: STHERM_c11130
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Entry
STHERM_c11130 CDS
T01315
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sta
Winmispira thermophila DSM 6192
Pathway
sta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STHERM_c11130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sta03019
]
STHERM_c11130
03016 Transfer RNA biogenesis [BR:
sta03016
]
STHERM_c11130
Enzymes [BR:
sta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STHERM_c11130
Messenger RNA biogenesis [BR:
sta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STHERM_c11130
Transfer RNA biogenesis [BR:
sta03016
]
Prokaryotic type
tRNA degradation factors
STHERM_c11130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
sCache_like
KH_KhpA-B
KH_2
PDCD7
KH-I_KHDC4-BBP
KH_11
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADN02058
UniProt:
E0RSS1
LinkDB
All DBs
Position
complement(1207946..1210075)
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AA seq
709 aa
AA seq
DB search
MEHSVTIDVGGRELVLTTGKMARQANGAVFAQYGGTCVLATACCGSDVKEDLDFIPLSVD
YNEKYYAAGKIPGGFFKREGRPREKEILVSRLIDRPMRPLFSKAFKREIQIIPTTVSADQ
INTPDVVAIVAASAAVTVSDIPFDGPVGAVRVGLVDGTFVINPTLEQLEASALDIVVAGT
LEGITMVEGGAKEVSEDTLVEAIEIARGAIVSLCKAQLELRERAGKEKLPLLEEESFPLK
DEVIAYARPRLEEACFVKGKLERAKAIKKTREEVRTYFGERIPDEQERAFNAVIEELERE
IVRSSILERGIRTDGRGPEDIRPITCEIGVLPRTHGSALFTRGETQALAITTLGTVFDEQ
IMDDLEGDKRENFMLHYNFPPFSVGEVGRLYTGRREIGHGHLAHRALEAVLPSKDDFPYT
LRVVSEILESNGSSSMATVCGSTLSLLNAGVPIKKPVAGIAMGLVTDGERTVILSDILGE
EDHFGDMDFKVAGTEDGITAFQMDIKIKNIDPATMRKALEQARRGRLHILGIMNQAISEP
RPELSQYAPRIIKFAVDPEKIGLIIGSAGKTIRQISESFDVTINIDDDGSIVIYSKQKEN
AEQAKAYIDKMLEEPEVGKVYTGKVKRIVDFGAFIEFLPGREGLCHISQMSVDRIGSPHD
VVKLNQEVPVRILEIDRLGRVNLTMLIDESKAKEKAQSYSRRPPRTRRR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaacattcagtgacaatagacgtaggaggacgggaactcgttctcacgacaggaaag
atggcccgtcaagcaaatggagcggtcttcgcccagtacggaggcacgtgcgtcctcgca
actgcctgttgcgggagcgatgtgaaggaagacctcgatttcatccccctctctgtggat
tacaacgaaaaatactacgctgcaggcaagatccccggaggatttttcaagcgggaaggg
cgtccacgggagaaggagatcctcgtttcgcgtctcatcgacaggccgatgagacccctc
ttctcgaaggcgttcaagagggagatccagatcatccccaccacggtatccgctgatcag
atcaacacgcccgatgtggtggcgatcgtggcggcctctgctgccgtcaccgtctccgac
atccccttcgatgggccggtgggggcggtgagagtggggctcgtagacggcacgttcgtc
atcaaccccaccctggagcagctggaggcctcggctctcgatatcgtagtggcgggaacc
ctggaaggcatcaccatggtggaaggcggggcgaaagaggtctccgaggacaccttggtg
gaggcgatcgaaatcgcccgtggcgctatcgtttcgctctgcaaggcgcagctggagctt
cgcgaacgcgcaggcaaggaaaagcttcccctcctggaagaggagagcttcccgctcaag
gatgaagtgatagcatacgcccgtccccgactcgaagaggcatgcttcgtcaagggaaaa
ctcgaacgggcaaaggccataaagaagacgcgggaagaggtcagaacctacttcggagaa
cggattcccgatgagcaggaacgtgcctttaatgcggtgatcgaagagctcgaacgggag
atcgtacgttcctcgattctggaacgggggatccggacggacggaaggggaccggaggac
atacgccccatcacctgtgagatcggtgtccttcctcgaacgcatggatccgctctcttc
acgagaggcgagacccaggccctcgcgatcaccacactggggaccgtgttcgacgagcag
ataatggacgatctcgaaggcgacaaacgggaaaacttcatgctccactacaacttcccc
cccttctcggtaggtgaggtggggaggctctacacgggccgacgtgagataggccacggt
catctcgcacatcgggcgttggaagctgtgctcccctcgaaagacgacttcccctatact
ctccgcgtggtctcggagatcctcgaatcgaacggctcttcctcgatggcgacggtctgt
ggaagcaccctctccctgctcaatgcaggggtccccatcaagaaacccgtggccgggatc
gcgatgggactggtgacggacggagagcgcacggtgatcctttccgacatcctgggcgaa
gaggatcatttcggtgacatggacttcaaggtggccggtacggaagacggtatcacggcc
ttccagatggacataaagatcaagaacatagatccggccacgatgcggaaggccctcgag
caagcccgtaggggaaggctccacatactcgggatcatgaatcaggccatctccgaaccg
cgcccggaactctcccagtatgctccccgaatcatcaagttcgccgtcgatcccgagaag
ataggcctcatcatcggctccgccggtaagacgatcaggcagatctcggagagtttcgat
gtgaccatcaacatcgacgatgatgggagcatcgtcatctacagcaaacagaaggagaac
gccgagcaggcgaaggcctacatcgacaagatgcttgaggaaccagaggtgggaaaggtc
tacacggggaaagtgaaacggatcgtggatttcggagcattcatagaattcctgccgggc
agggaaggcctctgtcatatctcccagatgtcggtcgatcggatcggatcgccccacgat
gtggtgaagctgaatcaggaggtccccgtgaggatcctcgagatagatcgattggggagg
gtgaatctcaccatgctcatagacgagagcaaggcgaaggagaaggcgcagagctactcc
cggagaccgccccggactcgtcgcaggtag
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