Spirochaeta thermophila DSM 6192: STHERM_c11160
Help
Entry
STHERM_c11160 CDS
T01315
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sta
Spirochaeta thermophila DSM 6192
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sta03016
]
STHERM_c11160
Enzymes [BR:
sta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STHERM_c11160
Transfer RNA biogenesis [BR:
sta03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STHERM_c11160
Prokaryotic type
STHERM_c11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
MamL-1
Motif
Other DBs
NCBI-ProteinID:
ADN02061
UniProt:
E0RSS4
LinkDB
All DBs
Position
complement(1211132..1211998)
Genome browser
AA seq
288 aa
AA seq
DB search
MNGILLCHKPPGIRSFEVVERVRRRLGGVRTGHTGTLDRFAQGLLILLTGRCTRLTPIFH
SLSKEYEAVIEFGKETDTLDPEGRIIQVGPVPEEKALRETLGRFLGTYEQIPPAYSALRV
GGRRAHDLARRGEEPDLAPRRVEIYALSLLEWRPPYATVRVSCSGGTYIRALARDIGSSL
GTCAYVTELKRTAIGPIPSDGAVHPDKVTGEDVLTPEAFLNAYPETAPPLTVKPSHERGI
AHGIPLSDHMWDTPPEAQGYYTVVTRDGRVLAFIEKAEERYRYICVLP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatactcctctgtcataaacctcccggtatacggtccttcgaagtggtggaa
cgagtgcgcaggcgtctcgggggcgttcgtaccggtcataccggcaccctcgaccgtttc
gcccaagggcttctcatcctgctcacgggtcgatgcacccgactcacaccgatattccat
tcactatccaaggaatacgaagccgtcatcgaattcggcaaggagaccgacaccctcgac
cccgaaggcaggatcattcaggtgggccctgttcccgaagaaaaggcgctcagggagacg
ctcggaagattcctcgggacatacgaacagattcctcccgcctattcggccctgcgggtg
ggagggcgtcgggcacacgacctggcgagaaggggggaggagccggatctggcccccaga
cgtgtggaaatatacgcactttccctcctcgaatggaggcctccctatgcgaccgtacgg
gtctcctgctccggaggaacctacatacgggctctcgcccgcgacatcggatccagcctc
gggacctgtgcctatgtgaccgaactgaaacgcactgcgatcggtccgattccatccgac
ggcgcggttcatcccgacaaggttaccggcgaggatgtgctcaccccggaagcgttcctg
aacgcatatcccgaaacagccccccctttgacagtcaaaccttctcatgagaggggaata
gcccatggaatccctctttcggaccatatgtgggacacccctccagaggcacaagggtac
tacaccgtggtgactcgagatggcagggttctggccttcatcgaaaaggcggaagagagg
tatcgctacatatgtgtgcttccgtag
DBGET
integrated database retrieval system
