Winmispira thermophila DSM 6192: STHERM_c16370
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Entry
STHERM_c16370 CDS
T01315
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sta
Winmispira thermophila DSM 6192
Pathway
sta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STHERM_c16370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sta03400
]
STHERM_c16370
DNA repair and recombination proteins [BR:
sta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
STHERM_c16370
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
STHERM_c16370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ADN02577
UniProt:
E0RNI6
LinkDB
All DBs
Position
complement(1803460..1804287)
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AA seq
275 aa
AA seq
DB search
MGFRGGLPGCDTPIKVNKIMRRNKRTEGVVVRSRPVGDQDRQVVILSREGLLEATAYGAQ
RPSSRLGAAAQVGSRAVFYLYVNPVKGHVKVSDVDRVEVLGAGRLEGLAVFQLWADLVVA
THGAGHEAEVYRLLLEGRDALRRAGGVEEVERVLVGWLLRFLGLLGVAPEWDRCARCGRG
LGEEGAWWGSVEEGLLCRGCAVGREGAWWLSGAMRGVCAGFAEGRVGLGVRVRMEEGVRR
GLVRVVLERGEEAVGRRLASAGLVREVLGVSGGGG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccgtgggggtttaccagggtgcgatacccctattaaagtaaacaaaatcatg
cgcaggaacaagcgaacagagggggtggtggtccgctcccggccggtgggggatcaggac
agacaggtggtgatcctctctcgcgaggggctcctcgaggcgacggcctacggcgcccag
cggccttcttccaggttgggggcggctgcgcaggtgggctcccgggcggtcttctacctc
tacgtcaatccggtgaaggggcatgtgaaggtgtcggatgtggatcgggtggaggtgctg
ggcgcaggcaggctcgaggggctcgcggtgttccagttgtgggccgacctggtggtggcg
acgcatggggcggggcacgaggccgaggtgtatcggctgctcctggaggggagggatgcg
ctcaggcgggcgggtggggtggaggaggtggagcgggtgctggtggggtggcttctgcgg
ttcctggggctcctcggggtggcgccggagtgggatcggtgcgcacggtgcgggaggggg
ttgggcgaggagggggcgtggtgggggagtgtggaggagggactcctgtgcagggggtgt
gcggtggggcgggagggggcgtggtggttgagtggggcgatgcggggggtgtgtgcgggg
ttcgcggaggggagagtggggttgggggtgcgggtgcggatggaggagggggtgaggagg
ggtctggtgagggtggtgctggagcggggggaggaggcggtggggaggaggttggcgagt
gcgggtctggtgcgggaggtgctgggggtcagcgggggaggtggctga
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