Spirochaeta thermophila DSM 6192: STHERM_c17880
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Entry
STHERM_c17880 CDS
T01315
Name
(GenBank) putative transglycosylase, SLT family
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sta
Spirochaeta thermophila DSM 6192
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sta01011
]
STHERM_c17880
Enzymes [BR:
sta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
STHERM_c17880
Peptidoglycan biosynthesis and degradation proteins [BR:
sta01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
STHERM_c17880
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
ADN02723
UniProt:
E0RPE1
LinkDB
All DBs
Position
complement(1955714..1957795)
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AA seq
693 aa
AA seq
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MSMVRVSLCVAALGVVLVWACASEGGVEDGVVGVLDGLEEGRVEVLEGREAGVLARGAER
EEEGAAFFLGLVYEGMGLREEARVCMEVAAESGSVPARVGAVGWLMEDAYGRGDLAGVEE
WARRGVGYAELRGEAVARLVEVWARRGGGEREVLERVAEEGEGRARAWALWAVGERERVL
EEVRAGEVPEGVWVVGEWGVLGEAVGAVREGRYGEAVEGYRAYLKGGGRATPAVLADLYT
AFRLSGRLSEGASFFLSLAETRPEVRLSALDYAGRLFRFAGDYDRSDQVWETVGEEASSP
TLRARTAWYLFANAVRRGGDAPLALAPRLPALLHSTQELSPVLDEYVSELIRTGRFRTLP
RLYTALAPILSPPHRALLSTAILASASAGLLPLSPDEARTLKEALAQASSSPLTHPYYYL
LAHPDASPLAYYTRTPHTPRASDPAATRFIRLALRFRPLYPRLPSLLRPFLPLAAPSALF
DLARALSHAGLHYQAIHLLADLHEEGIPLPEDLVRTVLYPRPFLDEVEAALRTLSPHPSL
DQSLLYGLMREESLFSPSIVSHAHAVGLMQLVPATAEEERRRLRMEPGDLEDPSYNITLG
TSYLSRMLDRFSLPIYALAAYNAGPTRARAWTASYAHLPPLLWIEALPLPETRHYLRKVL
ASSVYYAYLYHGRSVRDELFRLTGTDVAQALSL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtgcgggtctccctgtgcgtcgcagcgctgggggtggtgttggtgtgggcc
tgtgcctcggagggtggggtggaggacggggtggtgggggtgctcgacgggctcgaggag
gggagggtggaggtgctcgaggggcgggaggcgggggtgctcgcccggggggcggagcgt
gaggaggagggggcggcgttcttcctggggctggtgtacgaggggatggggttgcgggag
gaggcgagggtgtgtatggaggtggcggcggagagcgggtcggtgcctgcgcgggtgggg
gccgtcgggtggctgatggaggatgcgtacgggcgaggggatcttgcgggggtggaggag
tgggcgaggaggggggtggggtacgcagagctgcggggggaggctgtggcgaggctggtg
gaggtgtgggcacggcggggagggggtgagagggaggtgctggagcgggtggccgaggag
ggggaggggagggcgcgggcgtgggcgctgtgggcggttggggagcgggagagggtgctg
gaggaggtgagggcgggggaggtgccggagggggtgtgggtggtgggggagtggggggtg
ctgggtgaggcggtgggggcggtgagggaggggcggtatggggaggcggtggaggggtac
cgggcgtacctgaagggaggggggagggccacgcccgcggtgctcgcagacctctacacc
gccttcaggctctcgggccgcctctcggagggcgcctccttcttcctttcgctggccgag
acgcgaccggaggtgcggctctctgccctcgactacgccggcaggctctttcgctttgca
ggcgactacgaccggtccgaccaggtgtgggagaccgtgggggaggaggcctcctccccc
acgctccgcgcccggaccgcctggtacctctttgcgaacgccgtccgccgtgggggggac
gcccccctcgccctcgccccccgcctccccgccctcctccacagcacgcaggagctctcc
cccgtgctcgacgagtacgtctccgagctcatacgcaccggccggttccgcaccctcccc
cgcctctacaccgccctcgcccccatcctctccccgccccaccgcgccctcctctccacc
gccatcctcgcctccgcctctgccggcctccttcccctttcccccgacgaggcgcgcacc
ctcaaggaggccctcgcacaggcctcctcctcgcccctgacccacccctactactacctc
ctcgcccaccccgacgcctcgcccctcgcctactacacccgcaccccgcacaccccccgc
gcctccgaccctgccgccacccgcttcatccgcctcgccctccggttccgtcccctctac
ccccgccttccctccctcctccgcccctttcttccccttgccgcaccctccgccctcttc
gacctcgcccgcgccctctcccacgccggcctccactaccaggccatccacctcctcgcc
gacctccacgaggaaggaatccccctccccgaggacctcgtccgcactgtgctctatccc
cgccccttcctcgacgaggtggaggccgcccttcgcaccctttctccccacccctccctc
gaccagtccctgctctacggactcatgcgcgaggagagcctcttctccccctccatcgtc
tcgcacgcccacgccgtgggcctcatgcagcttgttcccgccaccgccgaggaggaacgc
cgccgcctcaggatggaaccgggcgacctggaggacccctcctacaacatcaccctgggc
acctcctacctctcgcgcatgctcgaccgcttctccctccccatctacgccctcgccgcc
tacaacgcaggccccaccagggccagggcctggactgcctcctacgcccacctcccgccc
ctcctctggatagaggccctccccctccctgagacgcgccactaccttcgcaaggtcctc
gcctcctcggtatactacgcctacctctaccacggccgatcggtgagggacgaactcttc
cgcctcaccggaaccgacgtggcgcaggcactctcgctgtaa
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