Winmispira thermophila DSM 6192: STHERM_c18310
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Entry
STHERM_c18310 CDS
T01315
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sta
Winmispira thermophila DSM 6192
Pathway
sta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STHERM_c18310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sta03400
]
STHERM_c18310
Enzymes [BR:
sta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STHERM_c18310
DNA repair and recombination proteins [BR:
sta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STHERM_c18310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
AAA_16
PhoH
T2SSE
ATPase_2
SWI2_SNF2
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ADN02766
UniProt:
E0RPI4
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All DBs
Position
complement(2006161..2008104)
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AA seq
647 aa
AA seq
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MWVDVAFNLPLREPLTYRVEGEVPVGVRVRAPVRGRVLTGYVVGVRGNPPSGVAPEDLKP
VEKVLDEEPLFDGRVLSLAQWVSSYYLCGLGEALSAMIPGGRVQREAPVPYDEPAAYRRH
RLSPAQREAVEAVLSCTHPMFYLWGVTGSGKTEVYLTVAEHMLERGKGVLYLVPEIALTR
QVVETIRARFGQDVAVLHSRLTASQRLAEWRRIVRGEVRFVIGARSAVFAPIGDLGLIVL
DEEHESSYKSGATPRYHARQVAMHRARTEGALLLMGSATPSLEAYHLMHTGRLPFFHLPE
RVAGGEPPRIEIVSLKDHPGPLSKPLLREIERTKKEGKQTILFLNRRGFAHYVGCRACGF
EMTCRHCSLPLTYHRAEEVMVCHYCGYRTRPIDVCPSCGSVDVRYSGPGTEQVEKQLRET
FPFYRIARLDTDTARKKGVLERVLEEMESGQVDVLLGTQMIAKGFNFPRLGLVGVVLADT
GLHMPDFRAAERVFSLLVQVAGRAGRFMPGGRVVIQTYLPDHPGIVCAREHDLRRFYEEE
LEVRKETLFPPFSRLVRLVFRGRDERKVERDAGGFASLLSADLPEGVELLGPAPCPMERI
AGNYRYHLFLRSSSLAPMHGLLARTLPLFRPSSGVHLEVDVDPVQVV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtggacgtggccttcaatcttcccctccgtgaacccctcacgtaccgggtggag
ggagaggtccccgtgggcgtgcgggtacgggcgcccgtgagggggcgggtgctcaccggg
tacgtggtaggggtgagggggaatcctccttccggtgtggcacccgaggacctcaagccc
gtggagaaggtgctcgatgaagaacccctgttcgacgggcgtgtcctctctcttgcgcaa
tgggtgagttcctactacctatgcggactgggggaggccctctcggccatgatccccggc
gggagggtgcaacgcgaggcgcccgtgccgtatgatgaacctgcggcgtaccggcggcac
cggctctctccggcccaacgggaggcagtggaggccgtgctctcctgcacccaccccatg
ttctacctctggggcgtcaccggatcgggcaagaccgaggtatacctcacggtcgccgag
catatgctcgagcgagggaagggggtgctctacctggtgcccgagatcgccctcacccgc
caggtggtggagaccatccgcgcccggttcggccaggacgtggcggtgctccattctcgc
ctcaccgcctcacaacggctcgccgagtggcggaggatcgtccgtggcgaggtgcgcttc
gtcataggtgccaggagcgcggtcttcgcacccatcggcgacctcgggctcatcgtgctc
gacgaggagcacgagtcgagctacaagtcgggtgccaccccccggtaccacgcccgccag
gtggccatgcaccgcgcccgcaccgagggcgccctcctcctcatggggagcgccaccccc
tcgctcgaagcctaccatctcatgcatacagggcggcttcccttcttccaccttcccgag
cgtgtggcggggggagagcccccccgtatagagatcgtctccctcaaggaccatcccggc
ccgctctccaaacccctcctcagggagatcgagcgtaccaagaaagagggaaagcagacc
atcctcttcctcaacaggcggggattcgcccactacgtgggatgcagggcctgcgggttc
gagatgacctgccgccattgctcgctccccctcacgtaccacagggccgaagaggtgatg
gtctgccactactgcggctaccggaccagacccatcgacgtgtgtccctcgtgcgggagc
gtggacgtacgctacagcgggccgggcaccgagcaggtggagaagcaactcagggaaacc
tttcccttctaccgcatcgcccgactcgacacggacacggcccggaagaaaggcgtactc
gagcgcgtactcgaggagatggaatccggccaggtggacgtactcctcgggacgcagatg
atcgccaagggcttcaactttccccgcctcgggctcgtgggggtggtgttggccgatacc
gggttgcacatgcccgacttccgggccgccgaacgggtcttctccctcctcgttcaggtc
gcgggccgtgcgggcaggttcatgccgggtggtcgggtcgtcatccagacgtatctgccc
gatcatcctggcatcgtgtgtgcccgggagcacgatctccgtcgcttctacgaggaggaa
ctcgaggtgcgaaaggagacactcttccctcccttctcgagactcgtccgccttgtcttc
cggggaagggacgagcgcaaggtggagagggacgccgggggattcgcctccctcctttcg
gccgacctgcccgagggtgtcgagctcctgggccccgccccctgccccatggagaggatc
gccggcaactatcggtaccacctcttcctccgctcgtcctcactcgcccccatgcacggc
ctcctcgcccgcaccctccccctcttcaggccttcctcgggcgtgcacctcgaggtggac
gtggatccggtgcaggtggtatga
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