Winmispira thermophila DSM 6192: STHERM_c18330
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Entry
STHERM_c18330 CDS
T01315
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sta
Winmispira thermophila DSM 6192
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sta03016
]
STHERM_c18330
Enzymes [BR:
sta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
STHERM_c18330
Transfer RNA biogenesis [BR:
sta03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STHERM_c18330
Prokaryotic type
STHERM_c18330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2196
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADN02768
UniProt:
E0RPI6
LinkDB
All DBs
Position
complement(2008863..2009609)
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AA seq
248 aa
AA seq
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MGQRNIKVVLAYDGTDFVGWQRQPNGRSVQGVVEDALARMHKHPVHVHAAGRTDSGVHAV
GQCINFITDIDSLPVEKFALALNSFLPRDVKALQAEEVPPDFHARYSAVRREYRYYVFPS
PSPYPHLRRYSLWVNRLPDVRLLNAYASCIVGEHDFSSFCSPSDPSPSKVRLIHTASWFP
EGSQLVFRIVGNAFLWRMVRALVGTMLDLEKQKADPEMMRKILEARDRSAASDSAPAWGL
FLHEVQYE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagcgtaacatcaaggtggtgctcgcctacgatgggacggacttcgtggggtgg
cagcggcagccgaatggccggagtgtccaaggggtggtggaggatgccttggcgaggatg
cacaagcacccggtgcacgtccatgcggcgggccgcactgattcgggggtacatgccgtg
gggcagtgtatcaacttcatcaccgacatcgattccctcccggtggaaaagttcgccctt
gcgctcaactccttcctgccccgcgatgtgaaggccctccaggccgaggaggtgcctccc
gacttccacgcccgttacagcgcggtgcgtcgggagtaccgctactacgtctttccttcg
ccctcgccgtatccccacctcaggcgctacagcctgtgggtgaaccgcctgccggacgtc
cgtctcctcaatgcgtatgcctcctgcattgtgggcgagcacgatttctccagcttctgc
agcccgtcggatccgagcccgtccaaggtgcgcctcatccacaccgcttcgtggttcccc
gaggggtctcagctggtgttccgtatcgtggggaacgccttcctctggcggatggtacgg
gccctggtgggtaccatgctcgacctcgaaaaacagaaggccgaccccgagatgatgcgg
aagatcctggaggcgagggacagatcggcggcctcggacagcgccccggcgtgggggctc
ttcctccatgaggtgcagtatgagtga
DBGET
integrated database retrieval system
