Winmispira thermophila DSM 6192: STHERM_c18450
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Entry
STHERM_c18450 CDS
T01315
Name
(GenBank) transglycosylase, SLT family
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sta
Winmispira thermophila DSM 6192
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sta01011
]
STHERM_c18450
Enzymes [BR:
sta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
STHERM_c18450
Peptidoglycan biosynthesis and degradation proteins [BR:
sta01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
STHERM_c18450
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
Erythrovirus_X
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
ADN02780
UniProt:
E0RPJ8
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All DBs
Position
2020697..2022055
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AA seq
452 aa
AA seq
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MVVQDKRLVSLLQAGELSFRSRHRRKVGMGRYLFRREVLVCILISAALLPGDEAPSRPLR
TGPAEVPSWSHHAGPRGYTLRVPPHPLIEAERKRLLSKEGITWLARSLERARPFWHFISL
SIMEAGLPWELVYLPVVESAYNVHAVSRSGAVGLWQFMENSMHPWLTKNEWIDERRDFVL
STRAALEKLSYNYSVLGDWLLALAAYNCGLNRMLSIIHLTGLKDYFALAEGGHLPRQTTH
YVARFIAVVETASQAARHGLPISWEEPWEWEGLSVDRPVSLRLLSERTGVPLDILEEANA
SFLLGIAPPSSVIRIPRHHATAVREALESVPLLDITLHTVRTGDTLSALSRYYGVPLSLL
YLYNPDVRPRALTPGMTIIIPLVSPRTPPPPATLPASLRWEHHTVQEGESLWRIARTYGS
TVEWIALANGLSPSAVIHPGMRLKIPVPLVEE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgtacaggataaacgtctggtatctctacttcaggcgggtgaactatcctttcga
tcccgacatcgacggaaagtgggaatgggccggtatctatttcggcgagaagttctagtc
tgcatcctcatttcggcggccctcctcccgggggatgaggcgccgtcacgccccctccgc
accggaccggctgaggttccttcctggtcacaccacgcaggtcctcggggatacaccctc
cgggtgcccccccacccgctcatcgaggccgaacggaagcggctcctttcgaaagaagga
atcacatggctcgcccgcagcctcgagcgtgcgaggcccttctggcacttcatctccctc
agcatcatggaagcgggactcccctgggaactcgtctaccttccggtggtggagtcggcc
tacaacgtacacgcggtctcccgctcgggcgccgtggggctctggcagttcatggagaac
tccatgcacccctggctcacgaagaacgagtggatcgatgagcggcgtgacttcgtcctc
tccacccgggcggccctcgaaaaactctcctacaactactccgtcctgggagactggctc
ctcgccctcgccgcctacaactgcggcctcaaccgcatgctctccatcatacacctcacg
gggctcaaggattacttcgccctcgccgaaggaggccacctccctcgccagaccacacac
tacgtggcccgcttcatcgccgtggtggaaacggcgtcccaggcggcccggcacgggctc
cccatctcgtgggaggaaccgtgggaatgggaagggctctccgtggaccgaccggtctcg
ctccgtctcctctccgagcggaccggggtgccgctcgacatcctcgaggaggcgaacgcc
tccttcctcctggggatcgcccctccctccagcgtgatcaggatcccccgacaccatgcc
acagcagtgagggaagccctggaatcggtccccctgctggacatcaccctccacaccgta
cgtacaggcgacacactctccgccctctcacggtactacggagtccccctctccctcctc
tacctctacaacccggacgtccgtccacgcgccctcacgccgggcatgaccatcatcatc
cccctcgtctccccccgaacccctccaccccctgccaccctccccgcctccctcaggtgg
gaacaccacacggtccaggagggcgaatccctctggcggatcgcgcgcacctacggctcc
accgtggagtggatcgccctcgcgaacggcctctcaccttccgcggtcatccatccggga
atgcggctcaagatacccgtgcccctggtcgaggaataa
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