Spirochaeta thermophila DSM 6192: STHERM_c21210
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Entry
STHERM_c21210 CDS
T01315
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sta
Spirochaeta thermophila DSM 6192
Pathway
sta03420
Nucleotide excision repair
sta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STHERM_c21210
03430 Mismatch repair
STHERM_c21210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sta03400
]
STHERM_c21210
Enzymes [BR:
sta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STHERM_c21210
DNA repair and recombination proteins [BR:
sta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STHERM_c21210
MMR (mismatch excision repair)
Other MMR factors
STHERM_c21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ADN03052
UniProt:
E0RR75
LinkDB
All DBs
Position
complement(2340129..2342180)
Genome browser
AA seq
683 aa
AA seq
DB search
MVDLSYLETLNAEQREAVFHSGSPLLILAGAGSGKTRVITTKIAYLVDALGIPARSILAV
TFTNKAAREMYERALQLSPRTEGVMIKTFHSFGAWLLRLYGERLGLARDFAIYDDEDARA
LLSSILEGSQRRHLSRYAWAISRAKDYALGPEDDLSSILEDDDFPELYARYEDRLRDTGN
VDFGDLILLPLRLLKEHEDVRRKVHAAFRVVMVDEYQDSNVAQFFLLRELYGPETYLCVV
GDEDQSIYRFRGAEVRNILDFPDAFEGTHIVRLETNYRSTATILRAASGVIAHNEGRLGK
TLRPIRQGGDVIRILSFPSAEEEAAYWARFLREEGWEDVAVLYRAHYQSRLLELALAREG
VPYRVVGSLRFYEREEVKDLLAFLRLVLNPRDEVSFLRVINKPPRGIGAKSQEAIISHAR
GTGSTLVEVLREGVVPGKAGASMVEFARFLDHIGERLSRMDLASWMEDLLKESGLWDYYQ
GFDDYTARQKLENLQELLALARSYPGGRDGLLAFLEYVALEGSLDRGSGDGVVLITMHNT
KGLEFSKVIITGLEEGVFPSWAASSPEDIEEERRLFYVALTRAKDGLFLSWAQTRNIRGR
RSFQQASRFLREIPPECLSPSYEEEEEEDFPVGSRIYHDDYGYGMVVERRHNGNLLVVKV
RFETGYTCEFLPSYTPLERIRHE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatctttcgtatctcgagacgctcaatgccgaacaacgcgaggcggtctttcat
tccgggagtcccctcctcatactcgcaggggccggttccgggaaaacccgcgtcatcacc
accaagatcgcctacctggtggacgccttgggtattcccgctcggtcgatccttgcggtg
accttcaccaacaaggctgcccgggagatgtacgagcgtgccctccagctctcaccccga
accgaaggggtgatgataaagaccttccattcgttcggtgcctggctcctgaggctctac
ggagaacgcctgggcctcgctcgggatttcgccatctatgatgacgaggatgcacgcgcg
ctcctctcttcgattctcgagggcagccaacgccgacacctctcccgctatgcgtgggcg
atctcgagggcgaaggactacgcactcggtcctgaagatgacctctcctccatactggaa
gacgatgacttcccggagctctacgcgcggtacgaggatcggctcagggatacggggaac
gtggacttcggtgacctcatcctcctccccctcagactgctcaaggaacacgaggacgtg
aggcgcaaggtccatgccgcgttccgggtggtgatggtcgacgagtaccaggactcgaac
gtggcgcagttctttctcctcagggagctctacgggcccgagacgtacctctgcgtggtg
ggcgacgaagatcagtcgatctaccggttccggggggccgaggtgcggaacatcctcgac
ttcccggatgccttcgagggtactcacatcgttcgactcgagacgaactaccgatccacc
gcgaccatcctgagagccgcctcaggggtgatcgcccacaacgaggggcgtctcggcaag
acgctgaggccgatccgacaggggggggatgtgatccggatcctctcgttcccgtcggcg
gaggaggaggcggcgtactgggcacggttcctccgtgaggaggggtgggaggacgtcgcc
gtcctctaccgggcccactaccagtccaggctgctcgagctcgccctcgcgagggaaggg
gtaccctaccgggtggtgggatcgctccggttctatgagcgggaggaggtgaaggatctc
ctggccttcctgcggttggtgctcaatccccgtgacgaggtctccttcctcagggtgatc
aacaagccgccccgggggatcggcgcgaagagccaggaggccatcatctcgcacgcgcgt
ggcaccggatcgacgctggtggaggtgctccgagagggagtggtcccgggtaaggcgggg
gcctcgatggtggagttcgcccggttcctggatcacatcggggagcggctctcccgtatg
gacctcgcttcctggatggaggacctgctcaaggagagcgggctctgggactactatcag
ggattcgacgactacaccgcccgtcagaagctggagaacctccaggagctccttgccctc
gcccggtcgtatcccggaggcagggacggtctcctcgcctttctcgagtacgtggcgctc
gaagggagcctggacaggggatcgggtgacggggtggtgctcatcaccatgcacaacacc
aaggggctcgagttctcgaaggtcatcatcacgggcctggaggagggcgtctttccctca
tgggcggcttcgagtcccgaggatatcgaggaagaacgaagactcttctacgtggccctc
acgcgggcgaaggacgggctcttcttgagctgggcccagacgagaaacatcaggggcagg
aggagcttccagcaggcctcacggtttctcagggagatccctcccgagtgtctctccccc
tcgtacgaggaggaggaagaggaggacttccctgtagggagcaggatctaccacgacgat
tacggatacggtatggtggtggagcgccggcacaacgggaacctcctggtggtgaaggtc
cgcttcgagacagggtacacgtgcgagttcctgccttcgtacaccccgctcgagaggata
cggcatgagtga
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