Streptomyces tanashiensis: LDH80_04525
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Entry
LDH80_04525 CDS
T08718
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
staa01002
]
LDH80_04525
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
staa02042
]
LDH80_04525
Enzymes [BR:
staa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
LDH80_04525
Peptidases and inhibitors [BR:
staa01002
]
Metallo peptidases
Family M9
LDH80_04525
Bacterial toxins [BR:
staa02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
LDH80_04525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
Motif
Other DBs
NCBI-ProteinID:
UZX20021
LinkDB
All DBs
Position
complement(998238..1000589)
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AA seq
783 aa
AA seq
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MSLHRRVRSSLLASAIAVTLVASAGQAGAFAGTDDTPAQAPVLGAPAPQAQPGANPFDEV
EHRASAPRLTYGPAPAPGGLATGRVPGRAPAAATARTLAAAATGTTAAGVPCTLDGITGL
APERFADFLADPAVTADGCLRGLIWTWDARLAPVMSDAHVQAVARRISSLSASHDGRNSS
HLEEMFTYLHAVAYHDFSRGEIDTTDAPTVDAVRRAVADFGAAAHTFDVTSTNANTLREA
LNAASAPGLRQHQLGLIKRVLATMDPSHTATNLDPAWAGAALAGLSVNYLGVYPGNQDSA
FQAAAAADPAYRAAFKAFAGYSHLKGTANAWVVRDALGEYGRFGQIAALKDGIVADLGPL
LTTVVDTFGRGSQPWAKVVSWLNFYEACKPYGVCKEDIEKQLFPYTYTYDNGAIKVRTAL
DRATVDQLYYASKQVKAQYHRVIGTDQPLAGDNNTTLNIVLYASRADYENYHPILTGMDT
NNGGIYIERGATFYTYQRRVPQDSSLTLEELFRHEYTHYLNGRWAVPGSFGEGPWYQGDR
TTAMDEGTAEFFDGATRDNGIAVRKSLVRGIINDTAGGGPRMNVRQILNATYAGDGFRFY
NYAGTFFEFLWTERPSLLREMYTNLRANDVAAYDAWRNRLGSDAGLQRDYDRFLDTQIAK
VDQLYVPNTTFTPNDQLRDSALASVKSAFATATYNTPDCVENGDPGKRRFVCTGRITANL
SDANNPDKNFKDMSETVDYFILDRAGAASNNLADMNCSFGPIDIWSSRVAGTSSYSCEGP
LRS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttgtccctccacagacgtgtgcgctcgtccctgctcgcctccgccatcgcggtcaccctc
gtcgcctccgccggccaggcgggcgccttcgcgggcacggacgacacccccgcccaggcc
cccgtgctcggcgcaccggccccgcaggcgcagccgggagcaaaccccttcgacgaggtc
gaacaccgggcctccgccccgcgcctcacctacgggcccgcccccgcccccggcgggctc
gccaccggccgcgttcccggccgggcaccggccgccgccaccgcgcggaccctcgccgcg
gccgccaccggcaccacggcggccggcgtcccctgcaccctcgacgggatcaccggcctc
gccccggagcggttcgccgacttcctcgccgacccggcggtcaccgccgacggctgtctg
cgcggcctcatatggacctgggacgcccggctcgcccccgtgatgtccgacgcccacgtc
caggccgtcgcccgccgcatatcgagcctgtccgcctcccacgacggacggaactcctcc
cacctggaggagatgttcacctacctgcacgccgtcgcctaccacgacttctcccgcggc
gagatcgacaccaccgacgcccccaccgtcgacgccgtccgccgggccgtcgccgacttc
ggcgccgccgcccacaccttcgacgtcacgagcaccaacgcgaacaccctccgggaagcc
ctcaacgcggcgagcgcgcccggcctgcgccagcaccagctcggcctcatcaagcgagtc
ctcgccaccatggacccctcgcacaccgccaccaacctcgacccggcctgggccggtgcc
gcgctcgccggcctctccgtgaactacctcggcgtctacccgggcaaccaggacagcgcc
ttccaggcggccgccgccgccgaccccgcctaccgcgcggccttcaaggccttcgccggc
tacagccacctcaagggcaccgccaacgcctgggtcgtccgcgacgccctcggcgagtac
ggccgcttcggccagatcgcggccctgaaggacggcatcgtcgccgacctcggccccctg
ctcaccaccgtcgtcgacaccttcggccgcggcagccagccgtgggcgaaggtcgtctcg
tggctcaacttctacgaggcctgcaagccgtacggcgtgtgcaaggaggacatcgagaag
cagctcttcccctacacgtacacctacgacaacggggccatcaaggtccgcaccgcgctc
gaccgggccaccgtcgaccagctctactacgcgagcaagcaggtcaaggcccagtaccac
cgcgtgatcggcaccgaccagccgctcgccggcgacaacaacaccaccctgaacatcgtc
ctgtacgcctcccgcgcggactacgagaactaccaccccatcctcaccgggatggacacc
aacaacggcggcatctacatcgagcgcggcgccaccttctacacctaccagcggcgcgtc
ccgcaggactcctccctcaccctcgaggagctcttccgccacgagtacacccactacctg
aacggccgttgggccgtccccggctccttcggtgagggcccctggtaccagggcgaccgc
accaccgccatggacgagggcaccgccgagttcttcgacggagccacccgcgacaacggc
atcgccgtccgcaagtccctcgtccgcggcatcatcaacgacaccgccggcggcggcccc
cggatgaacgtccgccagatcctcaacgccacctacgccggcgacggcttccgcttctac
aactacgccggcaccttcttcgagttcctctggaccgagcggccctcgctgctccgcgag
atgtacacgaacctgcgggccaacgacgtggccgcgtacgacgcgtggcgcaaccggctg
ggctccgacgccggactccagcgcgactacgaccgcttcctcgacacgcagatcgccaag
gtcgaccagctgtacgtccccaacaccacgttcacgcccaacgaccagctgcgggactcg
gccctcgcgtccgtgaagtccgccttcgccaccgccacctacaacacccccgactgcgtc
gagaacggcgaccccggcaagcgccgcttcgtttgcaccgggcggatcaccgccaacctg
tccgacgcgaacaaccccgacaagaacttcaaggacatgtccgagaccgtcgactacttc
atcctcgaccgggccggcgccgcgtcgaacaacctggccgacatgaactgcagcttcgga
ccgatcgacatctggtccagcagggtcgcgggcacgtcgagctacagctgcgagggcccc
ctccgcagctga
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