Streptomyces tanashiensis: LDH80_04905
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Entry
LDH80_04905 CDS
T08718
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
staa
Streptomyces tanashiensis
Pathway
staa02024
Quorum sensing
staa03060
Protein export
staa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LDH80_04905 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LDH80_04905 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LDH80_04905 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
staa02044
]
LDH80_04905 (secD)
Secretion system [BR:
staa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LDH80_04905 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UZX20096
UniProt:
A0ABY6QQL6
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All DBs
Position
complement(1092639..1094927)
Genome browser
AA seq
762 aa
AA seq
DB search
MSSRASLRRALLALAVVALSLWITLTTPPRLGLDLRGGTRIVLQTEDGPTTRADAAATDR
ALEVLRKRVDGLGVAEPSLARSGERRIVVELPGLRDPRQAAETIGRTAQLTFHAVTGISQ
GPAGPAAADGKRVLPDPDAPGRFLALAAPALTGDGVKGAEATLDTTTGRGWTVDLSFRDG
AADGWAKLTGDAACAAPADPARRVAIVLDDRIVSAPGMQAGVPCGAGIGGGSAQITGGFS
AQEARDLAALVQGGALPVPVTTVEQSTVGPTLGAEAIRASALAAVIGLACTGLFVMVVYR
LLGVLATIALLLYGLISYAAVVALGATLTLPGLAGFVLAIGIAVDANVLVFERAREEYAS
LGRSAGRDLRRPVATAFGKVWSAVADSHITTLLAAGLLFVFATGPVKGFGVTLAIGVLTS
LITAMVITRLLADLTLGLPAVRRRPAVTGMAALGRLRTRLTRRVPRLMAHRRRWLTGCAG
LLLVALAGIGVRGVEFGVEFTGGRVVQYTAERPVDADTARTAVADAGFPDAVVQTTGDGD
VSVRVRETGDGEQREIREALTRVAGPVEVERDDLIGPSLGGELRTHALLALGLAVAAQLL
YLTVRFRWTYATAAVAAMAQDVLLVVGLFAWLGKPVDSVFLAALLTVVGYSVNDSVVVLD
RLRELRRRGGGVRLADLADRAVAQTLPRTVNTGMGALFVLVALAVLGGDSLTDFSVALLA
GVVLGMASTVFTAMPLAVALETRHPAPAAAAPRRSAGAGAVV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcgtgcctcgctccggcgcgcgctcctcgcgctcgccgtcgtcgcgctctcc
ctctggatcaccctgaccacccctccccgcctcggactcgacctccgcggcgggacccgc
atcgtcctgcagaccgaggacggacccaccacccgtgccgacgccgccgccaccgaccgc
gccctggaggtgctccgcaagcgcgtggacggcctcggcgtcgcggaaccctccctcgcg
cgctcgggcgagcggcgcatcgtcgtcgaactgcccggcctgcgcgacccgcgccaggcc
gccgagaccatcggccgtacggcgcagctcaccttccacgccgtcaccggcatctcacag
gggccggccggaccggccgccgccgacgggaagcgcgtcctgcccgaccccgacgccccc
ggccgcttcctcgccctcgccgcacccgccctcaccggcgacggagtcaagggcgccgag
gccaccctcgacaccacgaccggccggggctggaccgtcgacctctccttccgcgacggc
gccgcggacggctgggcgaagctgaccggcgacgccgcctgcgccgccccggcggacccg
gcgcgccgggtcgcgatcgtcctcgacgaccggatcgtctccgcgcccggcatgcaggcc
ggtgtcccctgcggggcgggcatcggcggcggctccgcgcagatcaccggcggattctcc
gcgcaggaggcacgcgacctcgccgcgctcgtccagggcggcgcgctgcccgtgccggtg
acgacggtcgagcagagcaccgtgggcccgacgctcggcgccgaggcgatccgggccagc
gctctggccgcggtcatcggcctggcgtgcacgggcctcttcgtcatggtggtctaccgg
ctcctcggcgtcctggccacgatcgccctcctgctgtacggactgatctcgtacgcggcg
gtcgtggccctgggcgccaccctcactctgcccggcctcgccggcttcgtcctcgccatc
ggcatcgccgtcgacgccaacgtcctggtcttcgaacgcgccagggaggagtacgcctcg
ctcggcaggtccgccggccgggatctgcggcggccggtcgcgacggccttcggcaaggtg
tggagcgccgtcgcggactcccacatcaccaccctgctcgcggccggcctgctgttcgtc
ttcgccaccgggcccgtcaagggcttcggtgtgacgctcgcgatcggcgtcctcacctcg
ctgatcaccgcgatggtcatcacccggctgctcgccgacctgacactgggcctgcccgcc
gtccgcaggcggcccgccgtgaccggcatggccgcgctcggccggctgcggacccggctg
acccgccgggtgccgcgcctgatggcccaccggcgccgctggctgaccggctgcgccgga
ctgctgctggtggccctcgccggaatcggcgtgcggggcgtggagttcggcgtcgagttc
accggcggccgggtcgtccagtacacggccgagcgcccggtggacgccgacacggcccgg
acggccgtcgcggacgcgggcttccccgacgccgtcgtgcagacgaccggcgacggcgac
gtctcggtgcgggtccgggagaccggggacggcgagcagcgggagatcagggaggcgctc
acccgggtggcgggcccggtggaggtggagcgcgacgacctgatcggcccgagcctcggc
ggagagctgcgcacccacgcgctcctcgcgctcggcctggcggtggcggcgcagctcctg
tatctgacggtgcggttccgctggacgtacgcgacggccgccgtggcggcgatggcacag
gacgttctgctcgtggtcggtctgttcgcctggctgggcaagccggtggacagcgtcttc
ctcgccgcgctgctcaccgtcgtcggctactcggtcaacgactcggtggtcgttctcgac
cggctgcgggaactgcgtcgccggggcgggggcgtgcggctcgcggacctcgccgaccgg
gccgtcgcccagacgctgccccgcacggtcaacaccgggatgggggcgctcttcgtcctg
gtggcgctcgcggtcctgggcggggactcgctcacggacttctccgtcgcgctgctcgcg
ggcgtggtgctcggcatggcgtccacggtgttcacggcgatgccgctggcggtcgccctg
gagacccggcatccggcaccggccgccgccgcgccgcgccggagtgcgggcgccggtgct
gtggtctga
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