Streptomyces tanashiensis: LDH80_08600
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Entry
LDH80_08600 CDS
T08718
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LDH80_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
staa03000
]
LDH80_08600
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_08600
Enzymes [BR:
staa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LDH80_08600
Transcription factors [BR:
staa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LDH80_08600
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LDH80_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
IBR
Motif
Other DBs
NCBI-ProteinID:
UZX20763
LinkDB
All DBs
Position
complement(1918042..1919520)
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AA seq
492 aa
AA seq
DB search
MHTDTERCVRAVQSKEARFDGVFFTAVRTTRIYCRPSCPAVPPKPENMEFHPSAASCQRA
GFRACKRCRPDTSPGSPEWNVRADAVARAVRLIQDGVVDREGVPGLARRLGWSTRQIERQ
LLAELGAGPLALARAQRAQTARLLIETTSMPFGEIAFAAGFSSIRTFNDTVREVFALTPG
ELRARAARRSPVRAAATPGVISLRLPYRAPLEPSNLFGHLAATAVPGVEEWRDGAYRRTL
SLPYGHGIVALAPRDGHIACRLSLTDPRDLTNAISRCRRLLDLDADPVAVDERLRADPLL
APLVDKAPGRRVPGTVDPAEFAVRAVLGQQVSTAAARTHAARLVTAHGVPVDDPEGGLTH
LFPGPEALAALDPETLALPRSRRTTLLTLVRALADGSLPLGPADDREEARARLLALPGFG
PWTTEIIAMRALGDPDAFLPGDLGVRRAAEGLGLPGTPAALTARAAHWRPWRAYAVQYLW
ATDDHPINHLPA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcgtacgggccgtccagtcgaaggaggcccgcttcgac
ggcgtcttcttcaccgccgtccgcaccacccggatctactgccggcccagctgccccgcc
gtcccgcccaagcccgagaacatggagttccaccccagcgccgcctcctgccagcgggcc
ggcttccgggcctgcaagcggtgccggcccgacaccagccccggctcccccgagtggaac
gtccgggccgacgccgtcgcccgcgccgtccggctcatccaggacggcgtcgtcgaccgt
gagggcgtccccggcctcgcccggcggctcggctggtccacccgccagatcgagcgccag
ctcctcgccgaactgggcgccggaccgctcgccctggcccgcgcccagcgcgcccagacc
gcccggctcctcatcgagaccacctcgatgcccttcggcgagatcgccttcgcggccggc
ttctcctccatccgcaccttcaacgacaccgtccgcgaggtcttcgccctcacccccggc
gagctccgcgcccgcgccgcccgccggtcaccggtccgggccgccgcgacccccggcgtc
atcagcctccggctgccgtaccgcgcccccctggaaccctccaacctcttcgggcacctc
gccgcgaccgccgtccccggcgtcgaggaatggcgcgacggtgcctaccggcggacgctg
agcctcccgtacggacacggcatcgtcgccctcgccccgcgcgacggtcacatcgcctgc
cggctctccctcaccgacccgcgcgacctcacgaacgcgatcagccgctgccggcgcctc
ctcgacctcgacgccgaccccgtcgccgtcgacgagcggctccgcgccgacccgctgctc
gccccgctcgtcgacaaggcgcccggccgccgggtgcccgggacggtggaccccgccgag
ttcgccgtacgggccgtcctcggccagcaggtctccaccgccgccgcccgcacccatgcc
gcccgcctggtcaccgcgcacggcgtccccgtcgacgaccccgagggcggactcacccac
ctcttcccgggccccgaggcgctcgccgccctcgaccccgagaccctcgccctgccgcgc
agccgccgcaccaccctcctcacgctcgtccgggccctcgccgacggctcgctcccgctc
ggccccgccgacgaccgcgaggaggcccgcgcccggctgctcgccctgcccggcttcggc
ccctggaccaccgagatcatcgccatgcgggccctcggcgaccccgacgccttcctcccc
ggcgacctcggcgtccgccgcgccgccgaaggactcggactgcccggcaccccggccgcg
ctcaccgcccgcgccgcgcactggcgcccctggcgcgcctacgccgtccagtacctctgg
gcgaccgacgaccacccgatcaaccacctgcccgcgtaa
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