Streptomyces tanashiensis: LDH80_09525
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Entry
LDH80_09525 CDS
T08718
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LDH80_09525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
staa03000
]
LDH80_09525
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_09525
Enzymes [BR:
staa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LDH80_09525
Transcription factors [BR:
staa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LDH80_09525
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LDH80_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UZX20938
LinkDB
All DBs
Position
complement(2115850..2117202)
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AA seq
450 aa
AA seq
DB search
MRDDDTRYEAVSSRDARFDGEFFFAVRTTGIYCRPSCPAVTPKRQNVSFYPTAAAAQGHG
FRACRRCRPDAVPGSAEWNVRADVVGRAMRMIGDGVVDREGVPGLAGRLGYSTRQVQRQL
TAELGAGPVALARAQRAHTARLLLQTTALPVTEIAFAAGFASVRQFNETIRAVYARTPSA
LRAEAGSGAGARTALAAGVPLRLAHRGPYAAGEVFDLLAAEAVPRVEEVVGTPGGRTYRR
TLRLPYGTGVVSVDERSGGRWLEARIHLTELRDLTTAVHRLRRLFDLDADPYAVAERLGA
APGLAAEVAARPGVRSPGTAEPEEFALRTVLGAEESARLVERHGTPLATACGTLTHVFPE
PAALTGHPVAGPLARALADGAVRLDSGADRDEAERALLTVPGVTAEAAALIRMRALGDPD
VPPRDTPGTEDWRPWRSYAARYLEPASPAV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggacgacgacacccgctacgaggcggtcagcagcagggacgcgcggttcgacgga
gagttcttcttcgccgtccgcaccaccgggatctactgccggcccagctgccccgccgtc
acgcccaagcggcagaacgtctccttctacccgacggccgccgccgcccagggccacggc
ttccgcgcctgccgccgctgccggcccgacgccgtgcccggctccgccgagtggaacgtc
cgggccgacgtcgtcggacgcgcgatgcggatgatcggcgacggcgtcgtcgaccgcgag
ggcgtgcccggactcgccggacgcctcggctacagcacccggcaggtccagcgccagctc
accgccgagctgggcgccgggcccgtcgcgctcgcccgcgcccagcgggcgcacaccgcg
cggctgctgctccagacgacggcactgcccgtcaccgagatcgccttcgccgccggattc
gccagcgtccgccagttcaacgagacgatccgcgccgtctacgcccgcacccccagcgcc
ctgcgcgccgaggcgggcagcggcgcgggagcccgcaccgcgctcgccgccggagtgccg
ctgcggctcgcccaccggggcccgtacgcggccggcgaggtcttcgacctgctcgccgcc
gaggccgtgccccgggtggaggaggtcgtcggcactcccggcggccgcacctaccggcgt
accctccgcctcccgtacggcaccggggtcgtctccgtggacgagcggtccggcggacgc
tggctggaggcccggatccacctcaccgagctgcgcgacctgaccacagccgtacaccgg
ctgcgccgcctcttcgacctcgacgccgacccgtacgcggtcgccgagcgcctcggggcg
gcccccgggctcgctgccgaggtggccgcccgcccgggtgtgcgctccccgggcacggcc
gagccggaggagttcgcgctgcggacggtcctcggcgccgaggagtcggcccggctcgtc
gagcggcacggcaccccgctggccaccgcctgcggcaccctcacccacgtcttccccgaa
ccggccgccctgaccggccaccccgtcgcggggccgctggcccgcgccctcgccgacgga
gccgtacgcctcgattccggcgccgaccgcgacgaggccgagcgcgccctgctcaccgtc
cccggcgtgaccgccgaggccgcggcgctgatccggatgcgcgccctcggcgaccccgac
gttcccccgagggacaccccgggcaccgaggactggcgcccctggcgctcctacgcggcg
cgctacctggagccggcctccccggcggtgtag
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