Streptomyces tanashiensis: LDH80_11125
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Entry
LDH80_11125 CDS
T08718
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
staa03032
]
LDH80_11125
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_11125
Enzymes [BR:
staa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LDH80_11125
DNA replication proteins [BR:
staa03032
]
Prokaryotic type
DNA Topoisomerases
LDH80_11125
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LDH80_11125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UZX21237
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All DBs
Position
2518284..2520743
Genome browser
AA seq
819 aa
AA seq
DB search
MARRSTKTPPPDDAYEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGMKPVQRRIV
FQMGEMGLRPERGFVKCARVVGEVMGKLHPHGDASIYDAMVRMAQPFSMRLPLVDGHGNF
GSLGNDDPPAAMRYTESRMAPAALLMTESIDEDTVDFAPNYDGQEREPVALPAAYPNLLV
NGASGIAVGMATNMPPHNLGEVIAAARHLIRHPNADLETLMRFVPGPDLPTGGRIVGLSG
IKDAYESGRGSFKIRATTAVETVTARRKGIVVTELPFTVGPEKVISKIKDLVGSKKLQGI
ADVKDLTDRSHGLRLVIEIKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFEVVRRRSEFRRTKKRDRLHLVEGLLVALLDIDEVIRLIRESENSAQAKE
RLMERFSLSEIQTQYILDTPLRRLTKFDRLELETERDRLNGEIDELTGILDSDAELRKLV
SAELAAVAKKFATDRRTVLLESAGAPVAAVSLEVADDPCRVLLSSTGLLARTATAELPEA
DPDAARVKHDLIVSAVAATQRGDVGAVTSTGRLLRLAVIDLPQLPDTASAPNLAGGAPLS
EFLSLEADETVVCLTTLDESSPGLALGTLQGVVKRVVPDYPANKDELEVITLKDGDRIVG
ATELRTGEEDLVFITSDAQLLRYQASQVRPQGRPAGGMAGIKLTAGAEVLSFTAVDPASD
AVVFTVAGSTGTLDSSTGTSAKLTPFDQYPRKGRATGGVRCQRFLKGEDVLILAWAGATP
ARAAQKTGAPVPLPAPDPRRDGSGTPLPKPVDVVAGPAS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagacaccgccgccggacgacgcgtacgaggagaggatcctc
gacatcgacgtggtcgacgagatgcagggctccttcctcgagtacgcgtactcggtgatc
tactcgcgcgccctccccgacgcccgcgacggcatgaagcccgtacagcgccgcatcgtg
ttccagatgggcgagatggggctgcgccccgagcgcggcttcgtcaagtgcgcccgtgtc
gtcggcgaggtgatgggcaagctccacccgcacggcgacgcgtcgatctacgacgcgatg
gtccgcatggcacagcccttctccatgcgcctccccctcgtcgacggccacggcaacttc
ggctccctgggcaacgacgacccgccggccgccatgcggtacacggagtcgcggatggcc
ccggccgcgctgctcatgaccgagtccatcgacgaggacacggtcgacttcgcgccgaac
tacgacggccaggagcgggagcccgtcgctctccccgccgcctatccgaacctgctggtc
aacggcgcgtccggaatcgcggtcggcatggcgacgaacatgcccccgcacaacctcggc
gaggtcatcgcggccgcccgccacctgatccgccacccgaacgccgacctcgagacgctg
atgcgcttcgtgcccggccccgacctgccgaccggcggccggatcgtcggcctctccggc
atcaaggacgcgtacgagtcgggccgcggctccttcaagatccgcgccaccacggccgtg
gagaccgtgacggcccgccgcaagggcatcgtcgtgaccgagctgcccttcacggtcggc
cccgagaaggtcatctccaagatcaaggacctggtcggctccaagaagctccagggcatc
gcggacgtcaaggacctcaccgaccgcagccacggactgcgcctggtcatcgagatcaag
aacggcttcgtgcccgaggcggtcctggagcagctctacaagctgacgccgatggaggag
tccttcggcatcaacaacgtggcgctggtcgacggccagccgctcaccctcggcctcaag
gagctcctggaggtctacctggaccaccgcttcgaggtggtccggcgccgctccgagttc
cgccgcaccaagaagcgcgaccggctccacctggtcgagggactcctcgtcgcgctcctc
gacatcgacgaggtcatccggctcatccgggagagcgagaactccgcccaggccaaggag
cgcctgatggagcgcttctcgctgagcgagatccagacgcagtacatcctggacaccccg
ctgcgccgcctcaccaagttcgaccgccttgaactggagaccgagcgcgaccgcctcaac
ggcgagatcgacgagctgaccgggatcctcgactccgacgcggagctgcgcaagctggtc
tcggcggaactggccgcggtcgccaagaagttcgccacggaccggcggacggtcctcctc
gaatcggcgggcgcgcccgtcgccgccgtctccctggaggtcgcggacgacccgtgccgg
gtgctgctctcctcgaccggtctcctcgcccgtacggcgacggcggagctgcccgaggcc
gacccggacgcggcgcgcgtgaagcacgacctgatcgtgtcggcggtggcggccacccag
cgcggtgacgtcggcgcggtgacctcgaccggccggctgctgcggctcgcggtgatcgac
ctgccgcagctgccggacaccgcgagcgcccccaacctggcgggcggcgcgccgctgtcg
gagttcctctccctggaggcggacgagacggtggtctgcctgaccacgctcgacgagtcc
tcgccgggcctcgccctcggcacgctgcagggcgtggtgaagcgcgtggtgccggactat
ccggcgaacaaggacgagctggaggtcatcaccctcaaggacggtgaccggatcgtcggc
gcgacggagctgcggacgggcgaggaggacctggtcttcatcacctccgacgcccagctc
ctgcgctaccaggcctcgcaggtgcggccccagggccgcccggcgggcggcatggccggc
atcaagctcaccgcgggcgccgaggtgctctcgttcacggccgtggacccggcctcggac
gccgtcgtcttcaccgtcgcgggctccacgggcaccctggactcctcgacgggcacgtcg
gcgaagctgacccccttcgaccagtacccgcgcaagggccgcgcgaccggtggtgtccgc
tgccagcgcttcctgaagggcgaggacgtcctgatcctggcctgggcgggagccaccccg
gcccgcgccgcccagaagaccggcgctccggtcccgctcccggcccccgacccccgccgc
gacggctcgggcactcccctcccgaagccggtcgacgtggtggccggcccggcgagctag
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