Streptomyces tanashiensis: LDH80_12270
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Entry
LDH80_12270 CDS
T08718
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa02024
Quorum sensing
staa03060
Protein export
staa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LDH80_12270 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LDH80_12270 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LDH80_12270 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
staa02044
]
LDH80_12270 (ffh)
Enzymes [BR:
staa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LDH80_12270 (ffh)
Secretion system [BR:
staa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LDH80_12270 (ffh)
Eukaryotic Sec-SRP protein
LDH80_12270 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
ArsA_ATPase
cobW
Zeta_toxin
AAA_22
AAA_31
APS_kinase
AAA_24
MeaB
MMR_HSR1
AAA_18
AAA_33
NPHP3_N
TsaE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UZX21447
UniProt:
A0ABY6QXQ7
LinkDB
All DBs
Position
complement(2789680..2791233)
Genome browser
AA seq
517 aa
AA seq
DB search
MFDTLSDRLAATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRAFIKQVKERSL
GSEVSQALNPAQQVIKIVNDELIAILGGETRRLRFAKTAPTVIMLAGLQGAGKTTLAGKL
GVWLKSQGHSPLLVACDLQRPNAVNQLSVVADRAGVAFYGPQPGNGVGDPVQVAKDSIEY
ARTKLYDVVIVDTAGRLGIDQELMQQAADIRDAVSPDEVLFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLSLIEKAQQTFDEEEAAKMASKLASKKGEAFTLDDFLAQMEQVRKMGSISKLLGMLPG
MGQMKEQIANIDEREVDRVGAIIKSMTPAERQDPTIINGSRRARIAKGSGVEVSAVKGLV
ERFFEARKMMSRMAQGGGMPGMPGIPGMGGGPGRQKKQVKQAKGKRKSGNPMKRKAEEQA
AAERREQAQAGGAFGLPAAGQTPKDFELPEEFKKFMG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgataccctctccgaccgccttgcagcgaccttcaagaacctccgcggcaagggc
cgtctgtccgaggcggacatcgacgccaccgcgcgcgagatccgtatcgcgctgctcgaa
gcggatgtcgccctgccggtcgtccgcgccttcatcaagcaggtcaaggagcgctcgctg
ggctcggaggtctcccaggccctcaaccccgcccagcaggtcatcaagatcgtaaacgac
gagctgatcgccatcctgggcggcgagacccgccgcctgcggttcgccaagaccgcaccg
accgtgatcatgctcgccggtctgcagggtgccggtaagaccaccctcgccggaaagctg
ggcgtctggctgaagagccagggccactccccgctgctcgtcgcctgtgacctccagcgc
cccaacgccgtcaaccagctctccgtcgtcgcggaccgcgcgggcgtggccttctacggc
ccgcagccgggcaacggcgtcggtgacccggtccaggtcgcgaaggactccatcgagtac
gcgcggaccaagctctacgacgtcgtcatcgtcgacaccgccggccgtctcggcatcgac
caggagctgatgcagcaggccgcggacatccgcgacgccgtcagccccgacgaggtcctc
ttcgtcgtcgacgccatgatcggtcaggacgcggtcaacaccgccgaggccttccgcgac
ggcgtcggcttcgacggcgtcgtgctctccaagctcgacggcgacgcccgcggtggtgcc
gcgctctccatcgcgcacgtcaccggcaagcagatcatgttcgcctccaacggcgagaag
ctggacgacttcgacgcgttccacccggaccgcatggcgtcccgcatcctcggcatgggc
gacatgctctccctcatcgagaaggcgcagcagaccttcgacgaggaagaggccgccaag
atggcctcgaagctcgcctcgaagaagggcgaggccttcacgctcgacgacttcctggcg
cagatggagcaggtccgcaagatgggctccatctcgaagctcctcgggatgctgcccggc
atgggccagatgaaggagcagatcgccaacatcgacgagcgtgaggtcgaccgcgtcggc
gccatcatcaagtcgatgaccccggccgagcgccaggacccgacgatcatcaacggctcc
cggcgggcccgtatcgccaagggctccggcgtcgaggtcagcgcggtcaagggcctggtc
gagcggttcttcgaggcccgcaagatgatgtcccgcatggcgcagggcggcggcatgccg
gggatgccgggcatcccgggcatgggcggcggcccgggccggcagaagaagcaggtcaag
caggccaagggcaagcgcaagagcggcaacccgatgaagcggaaggccgaggagcaggcc
gcggccgagcgccgcgagcaggcgcaggccggcggcgccttcggactcccggcggccggg
cagacccccaaggacttcgagctcccggaggagttcaagaagttcatgggctga
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integrated database retrieval system
