Streptomyces tanashiensis: LDH80_12320
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Entry
LDH80_12320 CDS
T08718
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
staa03036
]
LDH80_12320 (smc)
Chromosome and associated proteins [BR:
staa03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LDH80_12320 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Cep57_CLD_2
ABC_tran
MbeD_MobD
Motif
Other DBs
NCBI-ProteinID:
UZX21457
LinkDB
All DBs
Position
complement(2803990..2807532)
Genome browser
AA seq
1180 aa
AA seq
DB search
MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTTGRPPLGRAEVSLTIDNSDGALPIDYAEVTLTRIMFRGGSSEYQINGDTCR
LLDFQDLLSDSGIGREMHVIVGQGQLDSVLHADPMGRRAFIEEAAGVLKHRKRKEKALRK
LDAMQANLARVQDLTDELRRQLKPLGRQAAVARRAVVIQSDLRDARLRLLADDLVRLQQA
LTAEVADEAALLARKEATEAELRAALAEEAGLEAEARTLVPRLERAQQNWYALSQLAERV
RGTVSLADARVKSATSAPAEERRGRDPEDLEREAARVREQEAELEAALEAAERALEDTVA
HRADLERTLAAEERRLKDLARAIADRREGLARLHGQANAARSRAASAQAEIDRLAAARDE
AAERAAAAQEEYEQLKAEVDGLDAEDTEQGERYEAARRELADAEAALSAAREAAADAERR
RAATRARHDTLALGLRRKDGTGALLSAGLSGLLGPAAELLTVTPGYEIPVAAALGAAADA
LAADGPSAAAEALRLLRKQDAGRASLILAGTPEPIPAGASEPAEGHPYAADLVRGPAELL
GAVRRLLAGIVVVEDLDEAVELVRTRPALTAVTAEGDLLGAHFAQGGSAGAPSLLEVQAS
VAEAAAELDELGVLCEESAAARDEAGERRRAAASLVEELDTRRRAGERERSAVAQRLGRL
AGQARGAAGEAERTAAAAARAQEALEKAAAEAEELTERLLVAEEMPAEDEPDTSTRDRLA
IDGSNARQTEMEARLQVRTHEERVKALAGRADSLDRAARAEREARARAEQRRARLRHEER
VAGAVAAGARSLLAHVEVSLVRAERERAVAEAARADRERGLTVARARGRDLKAELDKLTD
SVHRGEVLGAEKRLRIEQLEAKALEEFGVEATALVAEYGPDQPVPPAPTADGDPEESSDV
RPRPFVRSEQEKRLKAAERAYHQLGKVNPLALEEFAALEERHRFLSEQLEDLKKTRTDLL
QVVKEVDLRVEQVFTEAYRDTAREFEGVFSRLFPGGEGRLVLTDPDNMLTTGVEVEARPP
GKKVKRLSLLSGGERSLTAVALLVSIFKARPSPFYVMDEVEAALDDTNLQRLIRIMRELQ
ESSQLIVITHQKRTMEVADALYGVSMQGDGVSKVISQRLR
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcaaggccctgaccctccgcggattcaagtcgttcgcctcggccaccacgctg
cggttcgagccgggaatcacctgtgtcgtgggccccaacggatcgggcaagtccaacgtc
gtggacgccctctcctgggtcatgggcgagcagggcgccaagtcgttgcgcggcggcaag
atggaggacgtcatcttcgccggcacgaccgggcgccccccgctcggccgcgccgaggtc
tcgctgaccatcgacaactccgacggcgcgctgcccatcgactacgccgaggtcaccctc
acccggatcatgttccgcggcggcagcagcgagtaccagatcaacggcgacacctgccgc
ctgctcgacttccaggacctgctctccgactccggcatcggacgcgagatgcacgtcatc
gtcggacagggacagctcgactccgtgctgcacgccgacccgatgggccggcgcgccttc
atcgaggaggccgccggcgtcctcaagcaccgcaagcggaaagagaaggcgctgcggaag
ctggacgcgatgcaggccaacctcgcgcgcgtgcaggacctcaccgacgaactccgccgc
cagctcaagccgctgggccggcaggccgccgtcgcccgccgcgccgtcgtcatccagtcc
gatctccgcgacgcccggctccgcctcctcgccgacgacctcgtccggctccagcaggcg
ctcacggcggaggtcgccgacgaggcggcgctgctcgcccgcaaggaggccaccgaggcc
gaactgcgcgccgccctcgccgaggaggccgggctcgaggcggaggcccgcaccctcgtg
ccccgtctggagcgtgcgcagcagaactggtacgccctctcccagctcgccgaacgcgtc
cggggcaccgtctccctggccgacgcgcgcgtgaagagcgccaccagcgcacccgccgag
gaacgccgcggccgcgacccggaggacctggagcgcgaggccgcccgcgtccgcgaacag
gaggcggagctcgaagccgccctggaggccgccgagcgcgccctggaggacaccgtcgcg
caccgcgcggacctggagcggaccctcgcggccgaggagcgccgcctcaaggacctggcc
cgtgccatcgccgaccggcgcgagggcctcgcccggctccacggccaggccaacgcggcc
cgctcgcgcgccgcctccgcccaggccgagatcgaccggctcgccgccgcccgcgacgag
gccgcggagcgggccgccgccgcccaggaggagtacgagcagctcaaggccgaggtcgac
ggcctcgacgcggaggacaccgagcagggcgagcggtacgaggccgcccgccgcgaactc
gccgacgcggaggccgcgctgagcgccgcccgcgaggccgccgccgacgccgagcgccgc
cgcgccgcgacccgggcccggcacgacaccctcgccctcgggctgcgccgcaaggacggc
acgggagcgctgctctccgctgggctcagcggactcctcggcccggcggccgaactcctc
accgtcaccccggggtacgagatccccgtcgccgccgccctcggcgcggccgccgacgcg
ctcgccgccgacgggccctccgccgccgccgaggccctgcgcctgctgcgcaagcaggac
gcgggccgggcctccctgatcctggcgggcacccccgagccgatcccggccggggcctcc
gagccggccgaagggcacccgtacgccgccgatctggtccgcgggcccgccgaactcctg
ggcgccgtccgcaggttgctcgccgggatcgtggtcgtcgaggacctcgacgaggcggtc
gagctggtcaggacccggcccgcgctgaccgccgtcaccgccgaaggcgacctgctcggg
gcgcacttcgcgcagggcggctccgccggcgcgcccagcctcctggaggtccaggcctcg
gtcgccgaggccgccgccgagctcgacgaactgggcgtcctgtgcgaggagtccgccgcc
gcgcgcgacgaggccggggagcgccgccgcgccgccgcgtcgctcgtcgaggagctcgac
acccgccgccgggccggcgagcgcgagaggtccgccgtcgcgcagcggctcgggcggctc
gccgggcaggccaggggagcggcgggggaggccgagcgcaccgcggcggccgccgcccgt
gcccaggaggcgctggagaaggccgccgccgaggccgaggagctgaccgaacggctcctc
gtggccgaggagatgccggccgaggacgagcccgacacctccacgcgcgaccggctcgcg
atcgacggctccaacgcgcgccagaccgagatggaggcgcgcctccaggtccgtacccac
gaggagcgggtcaaggcgctcgccgggcgggccgactcgctcgaccgggccgcccgcgcc
gaacgggaggcacgcgcgcgtgccgaacagcgccgggcccggctgcgccacgaggagcgc
gtcgcgggcgcggtcgccgccggcgccaggtccctcctggcccatgtggaggtctcgctg
gtccgcgccgagcgggagagggcggtggccgaggcggcgagggccgaccgggagcggggc
ctgacggtcgcccgggcccggggcagggacctcaaggccgagctcgacaagctgacggac
tccgtgcaccggggcgaggtgctcggcgcggagaagcggctgcggatcgagcagctggag
gcgaaggcgctggaggagttcggggtggaggcgaccgcgctggtcgccgagtacggcccg
gaccagcccgtgcccccggcacccacggcggacggggatccggaggagtcgtccgatgtc
cgcccgcggccgttcgtccgttcggagcaggagaagcggctcaaggccgccgaacgggcg
taccaccagctcggcaaggtcaatccgctggccctggaggagttcgcggccctggaggag
cggcaccggttcctctcggagcagctggaggacctgaagaagacccgtaccgacctgctt
caggtcgtgaaggaggtcgacctgcgcgtcgagcaggtcttcaccgaggcctaccgggac
accgcccgtgagttcgaaggcgtcttctcgcggctcttcccgggcggcgagggccggctc
gtcctcaccgacccggacaacatgctcaccaccggcgtcgaggtggaggcccgtcctccg
ggcaagaaggtcaagcgcctctcgctgctctccggcggggagcgctcgctcaccgctgtg
gcgctgctggtctcgatcttcaaggccaggcccagcccgttctatgtgatggacgaggtc
gaggcggcgctcgacgacaccaatctccagcggctgatccggatcatgcgcgaactccag
gagtcctcgcagctgatcgtgatcacgcaccagaagcggacgatggaggtcgcggacgcg
ctgtacggcgtgtccatgcagggcgacggcgtctcgaaggtgatcagccagcgactgcgc
tga
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