Streptomyces tanashiensis: LDH80_12360
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Entry
LDH80_12360 CDS
T08718
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDH80_12360 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
staa03019
]
LDH80_12360 (rnc)
03009 Ribosome biogenesis [BR:
staa03009
]
LDH80_12360 (rnc)
03036 Chromosome and associated proteins [BR:
staa03036
]
LDH80_12360 (rnc)
Enzymes [BR:
staa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LDH80_12360 (rnc)
Messenger RNA biogenesis [BR:
staa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LDH80_12360 (rnc)
Ribosome biogenesis [BR:
staa03009
]
Eukaryotic type
90S particles
RNase
LDH80_12360 (rnc)
Prokaryotic type
rRNA processing factors
LDH80_12360 (rnc)
Chromosome and associated proteins [BR:
staa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LDH80_12360 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UZX21465
UniProt:
A0ABY6QUG5
LinkDB
All DBs
Position
complement(2812480..2813274)
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AA seq
264 aa
AA seq
DB search
MSESISAASSHTLLEGRLGYQLESALLVRALTHRSYAYENGGLPTNERLEFLGDSVLGLV
VTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEGTGGRDKASI
LADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSNLGAGLDWKTSLQELTAAEGLGV
PEYLVSEEGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRAIRAAADERAAA
AKAAADAGTAGEQDRTDGVTPATA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagcatcagcgcagcctcgtcccacacgcttctggaagggcggctcgggtat
cagctcgagtccgcccttctggtgcgtgcgctgacccaccgctcgtacgcgtacgagaac
ggcggtctgcccaccaacgagcgtctggagttcctcggggactccgtgctcggcctggtg
gtcacggacacgctgtaccgcacccaccccgatctgccggaaggccagctggccaaactg
cgggccgcggtggtcaactcgcgtgcgctggcggaggtcggccgcggcctcgaactcggc
tccttcatccggctcggccggggcgaagagggcacgggcggccgggacaaggcgtccatc
ctcgccgacacccttgaagcggtgatcggcgcggtctatctcgaccagggcctcgacgcg
gcgtccgagctggtgcaccggctcttcgacccgctgatcgagaagtcctcgaacctcggt
gccggcctggactggaagaccagcctccaggagctcaccgcggccgagggcctgggtgtt
ccggagtacctcgtctccgaggagggtccggaccacgagaagacctttactgctgccgcc
cgcgtcggtggtgtctcgtacggcaccggcaccggccgcagcaagaaggaagcggagcag
caggccgcggaatccgcgtggcgtgcgatccgcgcggccgcggacgagcgtgcggcggcg
gcgaaggccgcggccgacgccggcacggccggcgagcaggaccggacggacggggtcacc
ccggccaccgcctga
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