Streptomyces tanashiensis: LDH80_12390
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Entry
LDH80_12390 CDS
T08718
Name
(GenBank) DEAD/DEAH box helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDH80_12390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_12390
Enzymes [BR:
staa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDH80_12390
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LDH80_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
tRNA_anti-codon
RecG_dom3_C
RecG_wedge
LAGLIDADG_3
ResIII
Cas3-like_C_2
Hom_end
Motif
Other DBs
NCBI-ProteinID:
UZX21469
LinkDB
All DBs
Position
complement(2816573..2819800)
Genome browser
AA seq
1075 aa
AA seq
DB search
MEGVPALDEPLKKSLGPATAKVMAEALDLHTVGDLLHHYPRRYAERGELTTLSDLPLDEH
VTVVAQVADARVHTFNGSKGRGQRLEVTITDGSGRLQLVFFGKGVHKPHKDLLPGTRAMF
SGKVSLFNRRLQLAHPAYELLRADGDDGTAASADSVAGWAGALIPIYPATTKLESWKIAK
AVDAVLPSAVDAVDPLPPALREGRGLTELPEALRMIHRPRTKADIAAARERLKWDEAFVL
QVALARRRHADTQLPAVARRPAPDGILDAFDAKLPFTLTDGQTKVSKEIFDDLATEHPMH
RLLQGEVGSGKAQPLDSLVLTSVGFRRMGDMRVGDEVIVPTGETAVIDGVFPQGEREVWR
ILLSDGTAVECDDEHLWIVGTSCAWHHGQTPKVLTTREIRHDLLKANGSSKWYIPAAAPV
DLGDGATLPLDPYLLGVLLGDGSFRHNLRLSTTDAEIHDAVATSVEPDCKLTPVVGSRCD
YTVQLVRRAGGVRNPVIRALRDLDLWGATSHDKFIPEQFKNATIKDRLAVLQGLLDTDGT
VHQDGMSVSLCSASRLLAEDVAWLVRSLGGRARVLPKGTAFNVSVALPDEYPPFRLTRKA
ERMRPRPEYNTFRRGIRAVEYVGRKAVQCISVAHADHAYVTDHFTVTHNTMVALRAMLAV
VDSGGQAAMLAPTEVLAQQHHRSVTEMMGELAEGGMLGGSDRATKVVLLTGSMGAAARRQ
ALLDLVTGEAGIVIGTHALIEDKVKFHDLGLVVVDEQHRFGVEQRDALRGKGKQPPHLLV
MTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAADKPHFLARAWERVREEVGN
GHQAYVVCPRIGDEEDQKKKSKASPEDEAEKRPPLAVLDVAEKLRTGPLAGLRIAVLHGR
MHPDDKDDVMRRFAAGELDVLVATTVIEVGVNVPNATAMVIMDADRFGVSQLHQLRGRVG
RGSAPGLCLLVSEMPEASPARQRLNAVATTLDGFELSRIDLEQRREGDVLGQAQSGVRSS
LRVLTVIDDEEVIAAAREEATALVLADPDLTAHPGLRTALDALLSEEREEYLEKG
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgtgcccgcgctcgacgaaccactcaagaagtccctcggccccgccaccgcc
aaggtcatggccgaggcactcgacctgcacacggtcggggacctgctccaccactacccc
cgccggtacgccgagcgcggggagctgaccacgctctccgacctgccgctcgacgagcac
gtcacggtggtcgcgcaggtcgccgacgcccgtgtgcacaccttcaacggctccaagggg
cgcggccagcgcctcgaagtgaccatcaccgacggcagcggccgcctccagctggtcttc
ttcggcaagggcgtccacaagccgcacaaggacctgctgcccggcacccgggcgatgttc
tccggcaaggtctcgctcttcaaccgccgcctccagctcgcccaccccgcgtacgagctc
ctccgcgccgacggcgacgacgggaccgccgcgagcgccgacagcgtggccggctgggcc
ggcgccctcatcccgatctacccggccaccaccaagctggagtcctggaagatcgccaag
gccgtcgatgccgtcctgccgagcgccgtggacgccgtcgacccgctgccgcccgccctg
cgcgagggccgcggcctcaccgagctgcccgaggccctgcggatgatccaccgcccccgt
accaaggccgacatcgccgccgcccgcgagcggctcaagtgggacgaggccttcgtcctc
caggtcgccctcgcccgccggcggcacgccgacacccaactgcccgccgtcgcccggaga
cccgcccccgacggcatcctcgacgccttcgacgccaagctgcccttcaccctcaccgac
ggccagacgaaggtctccaaggagatcttcgacgacctcgccaccgaacaccccatgcac
cgcctcctccagggcgaggtcggctccggcaaggcgcagcctctggactccctcgtgttg
acctctgtgggattccgacggatgggcgacatgcgggtgggggacgaggtgatcgtgccc
acgggagagaccgcggtcatcgacggagtctttccgcaaggggagcgtgaggtgtggcgg
atccttctctcggacggaaccgccgtggagtgcgacgacgagcacttgtggatcgtggga
acgagctgcgcctggcaccacggccagacccccaaggtgctgaccacaagggagatccgg
catgacctcttgaaggcgaacggctcttcgaagtggtacatccctgccgccgccccggtc
gacctcggagacggggccacactgccgctcgatccgtacctgctcggtgtgctcctgggc
gacggctcgttccggcacaacctgcggctctccacgaccgatgccgagatccatgacgcc
gtcgcgacgtccgtggagccggactgcaagctcacccccgtggtcggctctcgttgcgac
tacacggtccagctcgtccggcgtgcgggcggcgtgcggaatcctgtgatccgagcgctg
cgcgacctggacctgtggggtgccacatcccatgacaagttcatccccgagcagttcaag
aacgccacgatcaaggaccgcctcgcggttctccaagggcttctggacaccgacggcacc
gtgcaccaggacggcatgagtgtgtcgctctgctccgcttcgcgcttgctcgcggaggac
gtggcgtggctcgtgcgctcgctcggagggcgagcgcgagttctgccgaaggggactgct
ttcaacgtctcggtggctctgcccgacgagtaccccccgttccggctcacccgcaaggcc
gagcggatgcgtccgaggcccgagtacaacaccttccggcgtggcatccgtgctgtggag
tacgtcggccggaaggccgtgcagtgcatcagcgtcgcgcatgccgaccacgcgtacgtg
actgatcacttcaccgtgacgcacaacacgatggtcgcgctgcgcgccatgctcgccgtc
gtcgactccggcgggcaggccgcgatgctcgcccccaccgaggtcctcgcccagcagcac
caccgctccgtcaccgagatgatgggcgagctcgccgagggagggatgctcggcggctcc
gaccgcgccaccaaggtcgtcctgctcaccggctccatgggcgccgccgcccgccgccag
gccctgctcgacctggtcaccggcgaggcgggcatcgtcatcggcacgcacgcgctgatc
gaggacaaggtcaagttccacgacctcgggctcgtcgtcgtcgacgagcagcaccgcttc
ggcgtcgaacagcgcgacgccctcaggggcaaggggaagcagcccccgcacctcctggtg
atgaccgccacccccatcccgcgcacggtcgccatgaccgtcttcggcgacctggagacc
tccgtcctcgaccagctgcccgccggccgctcgccgatcgccagccatgtcgtccccgcc
gccgacaagccgcacttcctcgcgcgcgcctgggagcgggtccgcgaggaggtgggcaac
gggcaccaggcctacgtcgtctgcccccgcatcggcgacgaggaggaccagaagaagaag
tccaaggcgtcccccgaggacgaggccgagaagcgcccgccgctcgccgtcctcgacgtc
gccgagaagctccgcaccggccccctcgcgggcctgcgcatcgccgtcctgcacggccgc
atgcaccccgacgacaaggacgacgtcatgcgccgcttcgccgccggcgaactcgacgtc
ctcgtcgccaccaccgtcatcgaggtcggcgtcaacgtgcccaacgccaccgccatggtg
atcatggacgccgaccgcttcggcgtctcccagctccaccagctccgcggccgcgtcggc
cgcggctccgcccccggcctctgcctcctcgtcagcgagatgcccgaggcgagccccgcg
cggcagcggctcaacgccgtcgcgaccaccctcgacggcttcgagctctcccgcatcgac
ctcgaacagcggcgcgagggcgacgtcctgggccaggcccagtccggcgtccgctcctcg
ctgcgggtgctcaccgtcatcgacgacgaggaggtcatcgccgccgcccgcgaggaggcc
accgccctggtcctcgccgatcccgacctcaccgcacacccgggcctgcgcaccgcgctc
gacgccctcctcagcgaggagcgggaggagtacctcgagaagggctga
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