Streptomyces tanashiensis: LDH80_12930
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Entry
LDH80_12930 CDS
T08718
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa00260
Glycine, serine and threonine metabolism
staa00460
Cyanoamino acid metabolism
staa00630
Glyoxylate and dicarboxylate metabolism
staa00670
One carbon pool by folate
staa00680
Methane metabolism
staa01100
Metabolic pathways
staa01110
Biosynthesis of secondary metabolites
staa01120
Microbial metabolism in diverse environments
staa01200
Carbon metabolism
staa01230
Biosynthesis of amino acids
staa01240
Biosynthesis of cofactors
staa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LDH80_12930
09102 Energy metabolism
00680 Methane metabolism
LDH80_12930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LDH80_12930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LDH80_12930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LDH80_12930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LDH80_12930
Enzymes [BR:
staa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LDH80_12930
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
SelA
Abhydrolase_9
RmlD_sub_bind
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
UZX21562
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All DBs
Position
2936036..2937304
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AA seq
422 aa
AA seq
DB search
MSLLNTPLHELDPDVAAAVDAELRRQQSTLEMIASENFAPVAVMEAQGSVLTNKYAEGYP
GRRYYGGCEHVDVAEQIAIDRIKDLFGAEYANVQPHSGASANQAALFAIAQPGDTILGLD
LAHGGHLTHGMRLNFSGKQFNVVAYHVDEAGLVDMAEVERLAKEHRPKVIIAGWSAYPRQ
LDFAEFRRIADEVEAYLWVDMAHFAGLVAAGLHPNPVEYADVVTSTTHKTLGGPRGGIIL
AKKEFAKKLNSSVFPGFQGGPLEHVIAAKAVSFKIAASEEFKERQQRTLDGARALAERLV
QDDVTAHGVSVLSGGTDVHLVLVDLRNSELDGQQAEDRLHEVGITVNRNAVPNDPRPPMV
TSGLRIGTPALATRGFQAEDFAEVADVIAETLKPGFDADKAAALKARVTALADKHPLYPG
LK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttctgaacactcccctccacgagctggaccccgacgtcgccgccgccgtcgac
gccgagctccgccgtcagcagtccaccctcgagatgatcgcctcggagaacttcgctccg
gtcgcggtcatggaggcccagggctccgtcctcaccaacaagtacgccgagggctacccg
ggccgccgctactacggcggctgcgagcacgtcgacgtggccgagcagatcgccatcgac
cggatcaaggacctgttcggcgccgagtacgccaacgtccagccgcactccggcgcctcc
gcgaaccaggccgccctcttcgcgatcgcccagcccggcgacacgatcctgggcctggac
ctggcgcacggcggccacctcacccacggcatgcgcctgaacttctccggcaagcagttc
aacgtggtcgcgtaccacgtggacgaggccggtctggtcgacatggccgaggtcgagcgc
ctcgccaaggagcaccgcccgaaggtgatcatcgcgggctggtccgcctacccgcgccag
ctggacttcgcggagttccgccggatcgccgacgaggtcgaggcctacctgtgggtcgac
atggcccacttcgcgggcctggtcgccgccggtctgcacccgaacccggtcgagtacgcg
gacgtggtgacctccaccacgcacaagacgctcggcggcccgcgcggcggcatcatcctc
gcgaagaaggagttcgcgaagaagctgaactcctcggtcttccccggcttccagggcggc
ccgctggagcacgtgatcgcggccaaggccgtctccttcaagatcgcggcctcggaggag
ttcaaggagcgccagcagcgcaccctcgacggcgcccgcgcgctcgccgagcgcctggtc
caggacgacgtcaccgcccacggtgtctccgtcctgtccggcggcacggacgtgcacctg
gtcctggtggacctgcgcaactccgagctcgacggccagcaggccgaggaccgtctccac
gaggtcggcatcacggtcaaccggaacgccgttccgaacgacccgcgcccgccgatggtc
acctcgggtctgcgcatcggcacgccggcgctcgcgacccgcggcttccaggccgaggac
ttcgccgaggtcgccgacgtcatcgccgagaccctgaagccgggcttcgacgccgacaag
gccgcggccctcaaggcccgggtgaccgcgctcgcggacaagcacccgctgtaccccggc
ctgaagtaa
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