Streptomyces tanashiensis: LDH80_16370
Help
Entry
LDH80_16370 CDS
T08718
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDH80_16370 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
staa03019
]
LDH80_16370 (groL)
03110 Chaperones and folding catalysts [BR:
staa03110
]
LDH80_16370 (groL)
03029 Mitochondrial biogenesis [BR:
staa03029
]
LDH80_16370 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
staa04147
]
LDH80_16370 (groL)
Enzymes [BR:
staa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LDH80_16370 (groL)
Messenger RNA biogenesis [BR:
staa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LDH80_16370 (groL)
Chaperones and folding catalysts [BR:
staa03110
]
Heat shock proteins
HSP60 / Chaperonin
LDH80_16370 (groL)
Mitochondrial biogenesis [BR:
staa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LDH80_16370 (groL)
Exosome [BR:
staa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LDH80_16370 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LDH80_16370 (groL)
Exosomal proteins of breast cancer cells
LDH80_16370 (groL)
Exosomal proteins of colorectal cancer cells
LDH80_16370 (groL)
Exosomal proteins of bladder cancer cells
LDH80_16370 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UZX22207
LinkDB
All DBs
Position
complement(3698685..3700307)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDELLATARPIEDKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILINQGKISSIQDLLPILEKVIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTITKDSTTIVDGGGNAEDIAGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLDKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADHGHGHGHSH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggccctggtccgc
gagggtctgcgcaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gccgccgtcaaggccgtctccgacgagctcctcgccaccgcgcgcccgatcgaggacaag
tccgacatcgccgccgtcgccgcgctctccgcgcaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctcgacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctcctcgatccaggacctgctgcccatcctggagaaggtcatccag
gccggcgccagcaagccgctcctgatcatcgccgaggacgtcgagggcgaggccctctcc
accctcgtcgtcaacaagatccgtggcaccttcaacgccgtggccgtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctcggcgacatggcgacgctcaccggcgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctcgacgtgctgggcaccgct
cgccgcgtgaccatcaccaaggactccaccaccatcgtcgacggtggtggcaacgccgag
gacatcgccggccgcgtcaaccagatcaaggccgagatcgagtccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctcgccggcggcgtgtgcgtcatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtcaaggtcctcgagggcaacctcgacaagaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctcgaaggtggcggagctcgacaagggccagggcttcaacgcc
gcgaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtgacg
cgctccgccctggagaacgccgcctcgatcgcctccctcctcctcaccaccgagaccctc
gtggtggagaagaaggaagaggagccggcggaccacggccacggtcacggccactcccac
tga
DBGET
integrated database retrieval system
