Streptomyces tanashiensis: LDH80_20350
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Entry
LDH80_20350 CDS
T08718
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03030
DNA replication
staa03430
Mismatch repair
staa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDH80_20350 (dnaN)
03430 Mismatch repair
LDH80_20350 (dnaN)
03440 Homologous recombination
LDH80_20350 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
staa03032
]
LDH80_20350 (dnaN)
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_20350 (dnaN)
Enzymes [BR:
staa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDH80_20350 (dnaN)
DNA replication proteins [BR:
staa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDH80_20350 (dnaN)
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDH80_20350 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
UZX22934
LinkDB
All DBs
Position
4508675..4509805
Genome browser
AA seq
376 aa
AA seq
DB search
MKIRVERDVLAEAVAWVARSLPARPPAPVLAGLLLKAEDGALSFSSFDYEVSARVSVEAE
VEEDGTVLVSGRLLADICRALPNRPVEISTDGVRATVVCGSSRFTLHTLPVEEYPALPEM
PTATGTVPGEVFASAAAQVAIAAGRDDTLPVLTGVRIEIEGDTVTLASTDRYRFAVREFL
WKPESPDASAVALVPAKTLLDTAKALTSGDTVTLALSGSGKGEGLIGFEGAGRRTTTRLL
EGDLPKYRTLFPTEFNSIAVIETAPFVEAVKRVALVAERNTPVRLSFEQGVLILEAGSSD
DAQAVERVDAQLDGDDISIAFNPTFLLDGLSAIDSPVAQLSFTTSTKPALLSGKPALDAE
ADEAYKYLIMPVRLSG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatccgggtggagcgcgacgtacttgccgaggcggtggcctgggtggcccgcagc
ctcccggcccgtccgccggctcccgtgctcgcgggccttctcctgaaggccgaggacggc
gcgctgagcttctcgagcttcgactacgaggtctcggcccgtgtctccgtcgaggccgag
gtcgaggaggacggcaccgtcctcgtctccggccgactgctcgccgacatctgccgcgcc
ctccccaaccgtcccgtggagatctccacagacggtgtacgggcgaccgtggtctgtggt
tcctcccgcttcaccctccacaccctgcctgtggaggagtacccggcgctgccggagatg
cccaccgcgacgggcaccgtccccggtgaggtcttcgcctccgccgccgcgcaggtggcc
atcgccgccggccgtgacgacacgctgcccgtcctcaccggtgtgcgcatcgagatcgag
ggcgacacggtcaccctggcctccaccgaccgctaccgcttcgcggtccgcgagttcctg
tggaagccggagtccccggacgcctccgcggtcgccctggtgcccgcgaagaccctcctg
gacaccgcgaaggcgctcaccagcggtgacacggtcaccctggcgctctccggctccggc
aagggcgagggcctcatcggcttcgagggcgcgggccgccgcaccaccacccgcctcctg
gagggcgacctcccgaagtaccggacgctcttccccaccgagttcaactcgatcgcggtg
atcgagacggctcccttcgtcgaggccgtgaagcgcgtggccctggtggccgagcgcaac
accccggtccggctgagcttcgagcagggcgtgctgatcctggaggccggctccagcgac
gacgcacaggctgtggagcgggtcgacgcgcagctggacggcgacgacatctcgatcgcc
ttcaacccgaccttcctgctggacggtctgagcgcgatcgactccccggtcgcccagctc
tccttcacgacctccaccaagccggcgctgctgagcggcaagcccgccctcgacgccgag
gcggacgaggcctacaagtacctgatcatgccggtgcggctgtcgggctga
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