Streptomyces tanashiensis: LDH80_20805
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Entry
LDH80_20805 CDS
T08718
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LDH80_20805 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
staa01007
]
LDH80_20805 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
staa03016
]
LDH80_20805 (aspS)
03029 Mitochondrial biogenesis [BR:
staa03029
]
LDH80_20805 (aspS)
Enzymes [BR:
staa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LDH80_20805 (aspS)
Amino acid related enzymes [BR:
staa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LDH80_20805 (aspS)
Transfer RNA biogenesis [BR:
staa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LDH80_20805 (aspS)
Prokaryotic type
Other AARSs
LDH80_20805 (aspS)
Mitochondrial biogenesis [BR:
staa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LDH80_20805 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UZX23013
LinkDB
All DBs
Position
4607697..4609505
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AA seq
602 aa
AA seq
DB search
MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAAE
VLDKLTKETVVRVDGKVVSRGAENVNPELPTGEIEIEALEVEVLGAAKQIPFTINADDGV
NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILAATSPEGARDF
VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFRESMLKYGNDKPDLRTDLELV
DLTDVFENSEFKAFAGKHVRALAVPDTGDQPRKFFDSLGDFAVSLGAKGLAWVRVGEGNA
LTGPIAKFLTEEDVKVLTERLGLEPGHAVFFGAGEFDEVSKIMGPVRVEAAKRAGRFEEN
VFRFAWIVDFPMYERDEETGKIDFSHNPFSMPQGGLQALETQDPLDVLGWQYDIVCNGIE
LSSGAIRNHEPEIMFKAFEIAGYSRETVESEFAGMLRAFEYGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLLMGAPTELDESRLRELNIQLRKPVEKKTTDITDAVHPDA
AR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgcgcctctgacgtcggcaccgac
gtccggctgagcggctggctgcacaatcggcgcgacctgggcggcatcctcttcatcgat
ctgcgcgaccactacggcatcacgcagctcgtcgcccggcccggcacccccgccgccgag
gtcctcgacaagctgacgaaggagaccgtcgtccgcgtggacggcaaggtcgtctcccgc
ggcgcggagaacgtcaaccccgagctgccgaccggcgagatcgagatcgaggccctcgag
gtcgaggtcctgggcgccgccaagcagatccccttcaccatcaacgccgacgacggcgtc
aacgaggagcggcgcctggagtaccgcttcctcgacctgcgccgcgagcgcatgcaccgc
aacatcatgctgcgctccgccgtcatcgcctccatccgctccaagatggtggccctcggc
ttcaacgagatggcgaccccgatcctcgccgcgacctcccccgagggcgcccgcgacttc
gtcgtcccgtcccgcctgaacccgggcaagttctacgcgctgccgcaggcgccgcagcag
ttcaagcagctgctgatgatctccggcttcgaccggtacttccagatcgcgccctgcttc
cgcgacgaggacgcccgcgccgaccgttcgccgggcgagttctaccagctcgacgtcgag
atgagcttcgtcgagcaggaggacgtcttccagccgatcgagaagctcatgacggagctc
ttcgaggagttcggcggcggccgccacgtcacctccccgttcccgcggatcccgttccgc
gagtcgatgctcaagtacggcaacgacaagccggacctgcgcaccgacctcgaactcgtc
gacctcaccgacgtcttcgagaactccgagttcaaggccttcgccggcaagcacgtccgc
gcgctcgccgtcccggacaccggtgaccagccgcgcaagttcttcgactcgctcggcgac
ttcgcggtctccctcggcgcgaagggcctggcctgggtccgcgtcggcgagggcaacgcc
ctcaccggcccgatcgccaagttcctcaccgaggaggacgtcaaggtcctgaccgagcgc
ctcggtctggagcccggccacgccgtcttcttcggcgccggcgagttcgacgaggtctcc
aagatcatgggcccggtccgggtcgaggccgccaagcgcgccggccggttcgaggagaac
gtcttccgcttcgcgtggatcgtcgacttcccgatgtacgagcgggacgaggagaccggc
aagatcgacttctcgcacaacccgttctccatgccgcagggcggcctccaggccctggag
acccaggacccgctggacgtcctcggctggcagtacgacatcgtctgcaacggcatcgag
ctctcctcgggcgcgatccgtaaccacgagcccgagatcatgttcaaggccttcgagatc
gcgggctactcccgcgagaccgtcgagtccgagttcgcgggcatgctccgcgccttcgag
tacggcgccccgccgcacggtggcatcgccccgggcgtcgaccgcatcgtgatgctcctc
gccgacgagcccaacatccgcgagacgatcgccttcccgctcaacggcaacgcccaggac
ctcctgatgggcgccccgacggagctggacgagtcccgcctgcgcgagctgaacatccag
ctccgcaagccggtcgagaagaagaccacggacatcacggacgcggtccacccggacgcg
gcgcggtag
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