Streptomyces tanashiensis: LDH80_25420
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Entry
LDH80_25420 CDS
T08718
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDH80_25420 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
staa03019
]
LDH80_25420 (orn)
03009 Ribosome biogenesis [BR:
staa03009
]
LDH80_25420 (orn)
Messenger RNA biogenesis [BR:
staa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LDH80_25420 (orn)
Ribosome biogenesis [BR:
staa03009
]
Eukaryotic type
Pre-60S particles
RNases
LDH80_25420 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UZX23845
UniProt:
A0ABY6R2V2
LinkDB
All DBs
Position
complement(5585738..5586340)
Genome browser
AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGDGVDIVIRPPDAALETMPEIVR
QMHTASGLLDALADGTTLADAEAQVLAYIREHVKEPGKAPLCGNSVSTDRGFLARDMPAL
EGHLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTAKRIAARHVVPAE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccgggctctcgctgacggacgac
gcactcatcgaggtggccgcactggtcaccgactcggaactgaacgtgctcggcgacgga
gtggacatcgtgatccgtccgccggacgccgccctggagaccatgcccgagatcgtgcgc
cagatgcacacggcctcggggctgctggacgcactcgccgacggcaccacgctcgccgac
gcggaggcccaggtcctcgcgtacatccgcgagcacgtcaaggagcccggcaaggcgccg
ctgtgcgggaactcggtctccacggaccgcggcttcctcgcccgcgacatgcccgccctg
gagggccacctgcactaccggatcgtcgatgtctcctcggtcaaggagctggcccgccgc
tggtacccgagggcgtacttcaacagtccggagaagaacggcaaccaccgggcgctcgcc
gacatccgcgagtccatcgccgagctgcgctactaccgcgaggcgatcttcgtcccgcag
cccggccccgactcggacaccgcgaagcggatcgcggcccggcacgtcgtccccgccgaa
tag
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