Streptomyces tanashiensis: LDH80_25635
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Entry
LDH80_25635 CDS
T08718
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDH80_25635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_25635
Enzymes [BR:
staa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LDH80_25635
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LDH80_25635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
TraI_hel_assoc_N
PIF1
Helicase_RecD
PhoH
NPHP3_N
HTH_IclR
nSTAND3
AAA_16
ABC_tran
TrwB_AAD_bind
AAA
ATPase_2
DUF87
UvrD_C
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UZX23883
LinkDB
All DBs
Position
5636313..5638538
Genome browser
AA seq
741 aa
AA seq
DB search
MSNEGRGPAVVEGVLERITYANEESGYTVARVDTGRGAGDLLTVVGALLGAQPGESLRME
GRWGSHPQYGKQFSVDNYTTILPATIQGIRRYLGSGLVKGIGPVFADRITQHFGLDTLDI
LEEAPARLIEVPGLGPKRTKNITAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDAS
ISVVRNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSSDQGHCFLP
EERLIADGVKLLQVDTGLVIECLGALADDPEGVVREVVPGPEGTPVTAVYLIPFHRAELS
LAGQVRRLLRTEEDRMPAFRDVAWDKALAWLADRTGASLAPEQEDAVRLALTRKVAVLTG
GPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDA
AYDRDRPLDADLIVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLGDL
LAPGSPVPAVRLTRIFRQAKQSGVVTNAHRINAGTPPQTQGLPDFFLFAEEETEDAARVA
VDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGSLNGLLQQAITPARPDLPEKRFGGRV
FRVGDKVTQIRNNYEKGANGVFNGTVGVVTALDTVEQRLTVRTDEDEEVAYDFDELDELA
HAYAVTIHRSQGSEYPAVVIPVTMSAWMMLQRNLLYTAVTRARKLVVLVGSRRAIAQAVR
TVSAGRRFTALAHRLTGEALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgagggtcgcggtcccgcagtggtcgaaggggtgctggagcggatcacctat
gccaacgaggagagcgggtacacggtcgcccgggtcgacaccgggcggggcgccggtgac
ctcctcacggtggtcggggcactgctcggcgcgcagccgggggagtcgctgcggatggag
ggccgctggggctcgcacccgcagtacggcaagcagttcagcgtggacaactacacgacg
atcctgcccgccacgatccagggcatccggcgctatctcgggtccgggctcgtcaagggc
atcgggcccgtcttcgccgaccgcatcacgcagcacttcgggctcgacaccctcgacatc
ctcgaagaggctcccgcgcggctgatcgaggttccggggctagggccgaagcgcacgaag
aacatcacggcggcctgggaggagcagaaggcgatcaaggaggtgatggtcttcctccag
ggggtgggggtctccacctccatcgcggtgcggatctacaagaagtacggggacgcctcc
atctccgtcgtgcggaaccagccgtaccggctggccgccgacgtgtggggcatcggcttc
ctcaccgcggacaggatcgcccaggccgtcggcatcccgcacgacagccccgaccgggtg
aaggccggcctgcagtacgcgctgtcgcagtccagtgaccaggggcactgcttcctcccg
gaggagcggctgatcgcggacggcgtgaagctgctgcaggtcgacaccgggctcgtcatc
gagtgcctcggcgcgctcgccgacgatcccgagggcgtcgtgcgggaggtcgtgcccggg
cccgaggggacgcccgtcaccgccgtgtacctgatccccttccaccgggccgagctgtcc
ctggccggccaggtccggcggctcctgcggaccgaggaggaccggatgccggccttccgg
gacgtggcctgggacaaggcgctggcctggctcgccgaccggacgggggcctccctcgcg
cccgagcaggaggacgccgtgcggctcgccctcacccgcaaggtcgccgtgctcaccggc
ggccccggctgcggcaagtccttcacggtccgctcgatcgtggagctggcccgcgccaag
aaggccaaggtcgtgctcgccgcgcccaccgggcgggccgcgaagcggctcgccgagctg
accggcgccgaggcctcgaccgtgcaccggctcctggagctgaagccgggcggggacgcg
gcctacgaccgggaccggccgctcgacgccgatctgatcgtcgtcgacgaggcctccatg
ctggacctgctcctggcgaacaagctggtcaaggcggtggcaccgggtgcccatctgctg
ctcgtgggggacgtcgaccagctgccgtcggtcggcgccggtgaggtcctcggcgacctg
ctggcccccggcagccccgtaccggccgtgcggctgacccggatcttccgtcaggccaag
cagtccggggtggtgacgaacgcgcaccggatcaacgccggcaccccgccgcagacccag
ggcctgccggacttcttcctcttcgccgaggaggagacggaggacgccgcccgggtggcc
gtggacgtcgcggcccggcggattccggccaagttcggcctcgacccgcgccgggacgtc
caggtcctcgccccgatgcaccggggcccggcgggcgcgggctcgctgaacggtctgctc
cagcaggcgatcaccccggcccgcccggacctgccggagaagcggttcggcggccgggtc
ttccgggtcggtgacaaggtgacccagattcggaacaactatgagaagggggccaacggg
gtcttcaacggtacggtcggcgtcgtcacggcgctggacaccgtcgagcagcggctgacc
gtgcggacggacgaggacgaggaggtggcgtacgacttcgacgagctggacgaactcgcc
cacgcgtacgcggtcaccatccaccgctcgcagggcagcgagtacccggcggtggtgatc
ccggtcaccatgagcgcctggatgatgctgcagcggaacctgctctacacggccgtgacc
cgggcccggaagctggtcgtcctggtcggctcccgccgggcgatcgcccaggcggtccgt
acggtctcggccggcaggcgctttaccgcactcgcccatcgcctcacaggggaggccctc
gtgtga
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integrated database retrieval system
