Streptomyces tanashiensis: LDH80_26490
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Entry
LDH80_26490 CDS
T08718
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa03030
DNA replication
staa03430
Mismatch repair
staa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDH80_26490 (holA)
03430 Mismatch repair
LDH80_26490 (holA)
03440 Homologous recombination
LDH80_26490 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
staa03032
]
LDH80_26490 (holA)
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_26490 (holA)
Enzymes [BR:
staa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDH80_26490 (holA)
DNA replication proteins [BR:
staa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDH80_26490 (holA)
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDH80_26490 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UZX24033
LinkDB
All DBs
Position
5838044..5839033
Genome browser
AA seq
329 aa
AA seq
DB search
MATRKTSPDDLLGPVTLAVGQEDLLLDRAVQEVVAAARAADADTDVRDLTPDQLQPGALA
ELTSPSLFAERKVLVVRNAQDLSADTIKDVKAYLDDPIEDISLVLLHAGGAKGKGLLDAA
RKAGAREVACPKTTKPAERLTFVRQEFRTLGRSATPEACQALVDSIGSDLRELASAVSQL
TSDVDGTIDEAVVGRYYTGRAEASSFNVADRAVEGRAAEALEALRWSLSTGVAPVLITSA
LAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVSLALRAIAEADA
GVKGGGDDPEYALEKAVVAVARAARMRRA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagaaagacttcccccgacgacctcctcggtcccgtgacgctcgccgtgggg
caggaggacctgctcctcgaccgagccgtccaggaggtggtggcggccgcccgggccgcc
gacgccgacacggacgtacgcgacctgacccccgaccagctccagcccggggcgctggcg
gagctcaccagcccctcgctcttcgccgagcgcaaggtgctggtcgtgcggaacgcgcag
gacctgtccgccgacacgatcaaggacgtcaaggcgtacctcgacgacccgatcgaggac
atctcgctcgtcctgctccacgccggcggcgccaagggcaaggggctgctcgacgcggcg
cgcaaggcgggggcccgggaggtcgcctgcccgaagacgacgaagccggcggagcggctg
acgttcgtgcggcaggagttccggacgctggggcggtcggccacgcccgaggcctgccag
gcgctcgtggactccatcggcagcgatctgcgggagctcgcgtccgcggtctcccagctc
acgtccgacgtggacgggacgatcgacgaggccgtcgtcgggcggtactacacgggccgg
gccgaggcctcctccttcaacgtcgccgaccgcgccgtcgaggggcgggccgccgaggcc
ctggaggccctgcgctggtcgctctcgaccggggtcgcgcccgtgctcatcaccagcgcg
ctggcccagggcgtacgggcgatcggcaagctgtcctcggcgcggggcggccggccggcc
gacctcgcgagggagctgggcatgccgccctggaagatcgaccgcgtgcggcagcagatg
cggggctggaccccggacggggtgtcgctggccctgcgggcgatcgccgaggcggacgcg
ggggtgaagggcgggggcgacgacccggagtacgccctggagaaggcggtggtcgcggtg
gcgcgggcggcgaggatgcggcgggcgtag
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