Streptomyces tanashiensis: LDH80_26715
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Entry
LDH80_26715 CDS
T08718
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
staa
Streptomyces tanashiensis
Pathway
staa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDH80_26715 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_26715 (recO)
DNA repair and recombination proteins [BR:
staa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LDH80_26715 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LDH80_26715 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DHQ_synthase
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UZX24076
UniProt:
A0ABY6R3M0
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All DBs
Position
5887559..5888308
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AA seq
249 aa
AA seq
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MSLFRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSELVGRGLPLCTQSETIAAYGGGIVTDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGGLRTLARGEHAPHLILDAFLLRSLAVNGYAPSFEDCAKCGLHGPNRFFSVAAGG
VICGDCRVPGSVVPSAEAIGLLSALLTGDWATADACEPRHVREGSGLVSAYLHWHLERGL
RSLRYVEKS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggtgaagcggac
cgcatcatcacgatcctcacgcgcggtcacggccgcgtacgcgctgtcgcgcggggcgta
cgccggacgaagtcgaagttcggggcgcgcctcgaacccttctcgcacgtggacgtgcag
ttcttcgcccgggggagtgagctggtcggacgcgggctgcccctctgcacgcagagcgag
acgatcgccgcgtacggcggcgggatcgtcaccgactacgcccggtacaccgccggcacg
gccatgctggagacggcggagcggttcaccgaccacgagggggagcccgccgtccagcag
tacctgctgctggtgggcggcctgcggacgctcgccaggggtgagcacgcgccgcacctc
atcctggacgccttcctcctccgctccctcgccgtgaacggctacgcgcccagcttcgag
gactgcgcgaaatgcggccttcacggcccgaaccggttcttttcggtcgcggcgggtggg
gtcatatgcggcgactgccgggtgcccggaagcgtcgtaccctcagcggaggccatcggc
ctgctcagcgcgctgctcaccggcgactgggcgacggcggacgcgtgcgagccgcgtcac
gtcagggagggcagcgggctcgtgtccgcctatctgcactggcacctggagcgcggcctg
cgctccctgcggtatgtagagaaaagctag
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