KEGG   Streptomyces tanashiensis: LDH80_28580
Entry
LDH80_28580       CDS       T08718                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
staa  Streptomyces tanashiensis
Pathway
staa00061  Fatty acid biosynthesis
staa00071  Fatty acid degradation
staa01100  Metabolic pathways
staa01212  Fatty acid metabolism
staa02024  Quorum sensing
staa04146  Peroxisome
Module
staa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:staa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LDH80_28580
   00071 Fatty acid degradation
    LDH80_28580
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LDH80_28580
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LDH80_28580
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:staa01004]
    LDH80_28580
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:staa04147]
    LDH80_28580
Enzymes [BR:staa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LDH80_28580
Lipid biosynthesis proteins [BR:staa01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LDH80_28580
Exosome [BR:staa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LDH80_28580
  Exosomal proteins of breast cancer cells
   LDH80_28580
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 Phage_tail_tube_init
Other DBs
NCBI-ProteinID: UZX24416
LinkDB
Position
complement(6298151..6299947)
AA seq 598 aa
MREFSLPALYEVPTDGNLTDLIRRNASQHPDVAVMGRKIDGVWTDVTATQFLAEVRSAAK
GLIASGVEPGDRVALLSRTRYEWVLLDFAIWSAGAVTVPVYETSSPEQIQWILGDSGAKA
VVVESAAHEESVASVRANLPELASVWRIDTDAVARLTAEGADVSDELLDERMSAANADDP
ATIVYTSGTTGRPKGCVLSHRAFFAECGNIVERLKPLFRTGECSVLLFLPAAHVFGRLVE
VASVMAPIRLGCVPDIKNLTDELASFRPTLILGVPRVFEKVYNSARAKAQADGKGKIFDK
AAHTAIAYSRAIGTPQGPSLGLKLKHKLFDKLVFSKLRAVLGGRGEYAISGGAPLGERLG
HFFRGIGFTVLEGYGLTESCAATAFNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHI
FSRYWNNEAATAEALRDGWFHTGDIGTLDEDGYLAITGRKKEILVTAGGKNVAPAVIEDR
IRAHALVAECMVVGDGRPFVGALVTIDEEFLGRWASEHGKPEGATAATLRDDAELIAEVQ
RAIDDGNAAVSKAESVRKFRILPAQFTEEAGHITPSLKLKRNVVAKDFADEIEAIYTV
NT seq 1797 nt   +upstreamnt  +downstreamnt
ttgcgcgagttcagccttccggccctgtacgaggtccccacggacggcaacctgacggat
ctcatccgccgcaacgcctcccagcacccagacgtcgccgtgatggggcgcaagatcgac
ggtgtctggaccgacgtcaccgccacgcagttcctcgccgaggtccgcagtgccgcgaag
ggcctgatcgcctccggcgtggagccgggcgaccgggtcgcgctgctctcccgtacgcgt
tacgagtgggtcctcctcgacttcgcgatctggagcgcgggcgcggtgaccgtgccggtg
tacgagacgagctcgccggagcagatccagtggatcctcggcgactcgggcgcgaaggcc
gtcgtggtcgagagcgcggcgcacgaggagtcggtggcctccgtccgggcgaacctgccg
gagctcgcgagcgtgtggcggatcgacaccgacgccgtcgcccggctcaccgccgagggc
gcggacgtctccgacgagctgctcgacgagcgcatgtcggcggcgaacgcggacgacccg
gcgacgatcgtctacacctcgggcacgaccggccgccccaagggctgcgtcctgtcccac
cgggccttcttcgccgagtgcggcaacatcgtggagcggctgaagcccctcttccgcacg
ggcgagtgctcggtgctgctgttcctgccggccgcgcacgtcttcgggcggctcgtcgag
gtcgcgtccgtgatggcgccgatccgcctcggctgcgtcccggacatcaagaacctcacc
gacgagctggcctcgttccggccgacgctgatcctcggcgtgccgcgcgtcttcgagaag
gtctacaactcggcgcgggcgaaggcgcaggccgacggcaagggcaagatcttcgacaag
gccgcgcacacggccatcgcgtacagccgggcgatcggcaccccgcagggcccgtccctc
ggcctgaagctgaagcacaagctcttcgacaagctggtcttcagcaagctgcgggcggtg
ctcggcggtcgtggcgagtacgcgatctcgggcggcgctccgctgggcgagcggctcggc
cacttcttccggggcatcggcttcacggtcctggaggggtacggcctgacggagtcgtgc
gcggcgaccgcgttcaacccctgggaccggcagaagatcggcacggtcggtcagccgctg
ccgggctcggtggtgcggatcgccgacgacggcgaggtgctgctgcacggcgagcacatc
ttctcgcggtactggaacaacgaggcggcgacggccgaggcgctgcgcgacggctggttc
cacacgggtgacatcggcacgctcgacgaggacggctacctcgcgatcacgggccgcaag
aaggagatcctggtgacggcgggcggcaagaacgtcgcccccgcggtcatcgaggaccgg
atccgggcgcacgcgctggtcgcggagtgcatggtcgtaggcgacgggcgtccgttcgtg
ggcgcgctggtcacgatcgacgaggagttcctcggccgctgggcgagcgagcacggcaag
cccgagggggcgacggcggccaccctccgcgacgacgcggagctgatcgcggaggtccag
cgggcgatcgacgacggcaacgcggcggtctccaaggcggagtcggtccgcaagttccgt
atcctcccggcgcagttcaccgaggaggcgggccacatcaccccgtccctgaagctgaag
cggaacgtggtggcgaaggacttcgccgacgagatcgaggcgatctacacggtctga

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