Streptomyces tanashiensis: LDH80_31320
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Entry
LDH80_31320 CDS
T08718
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
staa03051
]
LDH80_31320 (pafA)
Enzymes [BR:
staa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LDH80_31320 (pafA)
Proteasome [BR:
staa03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LDH80_31320 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UZX24923
UniProt:
A0ABY6R4F5
LinkDB
All DBs
Position
6891893..6893254
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEVQREYYEKAVDFVDRRGIRSGTV
AQVLELWGRTLDAIESERLDRIETEIDWVMKHRLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLYYLLQKNGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtctcctgacgaagtggcgcgctacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctgtacctcgacgtgggttcg
catccggaatacgccacaccggaatgcgacaacgtgaccgaactggtcacccacgacaag
gccggcgagcgcattctcgagggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctacctcttcaagaacaacaccgactcggccggaaactcctac
ggctgccacgagaactatctcgtcgcccgccacggggagttctcccggctcgcggacatc
ctcattcccttcctcgtgacgcggcagctcatctgcggcgcgggaaaggtcctccagacc
ccgcgcggcgcggtctactgcgtctcccagcgtgccgagcacatctgggagggcgtcagt
tcggccaccacccgctcgcggcccatcatcaacacccgtgacgagccgcacgccgacgcc
gagcgctaccgccggctgcacgtcatcgtgggcgactccaacatgtccgagacgaccatg
ctgctcaaggtcggcgccaccgacctcgtgctccgcatgatcgaggcgggcacggtgatg
cgggacctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacatcacg
ggccagcgcaaggtccgcctcgccagcggccgcgaggcctccgccctggaggtccagcgc
gagtactacgagaaggccgtcgacttcgtggaccgcaggggcatccgctccggcacggtc
gcccaggtcctggagctgtggggccgcacgctcgacgcgatcgagagcgagcggctcgac
cggatcgagaccgagatcgactgggtcatgaagcaccggctgatcgagcggtaccgggcc
aagcacaacatgaccatgtcgaacccgagggtcgcccagatagacctcgcctaccacgac
atccaccgccgtcgtgggctctactacctgctccagaagaacgggcaggcggcccgcatc
tgcaacgacctgaagatcttcgagggcaagtcggtgcccccgcagaccactcgggcccgg
ctgcgcggcgacttcatccgccgcgcgcaggagcagcggcgggacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcccagcgaacggtgttgtgcaaggacccgttccgc
tccgtcgacgaccgggtggaaaagctgatcgccggaatgtag
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