Streptomyces tanashiensis: LDH80_31370
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Entry
LDH80_31370 CDS
T08718
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
staa03019
]
LDH80_31370
Enzymes [BR:
staa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LDH80_31370
Messenger RNA biogenesis [BR:
staa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LDH80_31370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UZX24932
UniProt:
A0ABY6R4M8
LinkDB
All DBs
Position
6899865..6902693
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AA seq
942 aa
AA seq
DB search
MTEDLTPAEAYAAARARNAEQATALAPFRELYEFGLDPFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALTQGRKCFYTTPIKALSNQKYADLVKRYGADKVGLLTGDNSVNGDA
PIVVMTTEVLRNMLYAGSQALSGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSESRPVPLWQHVLAGRRMYDLFEEETDHGGRGASR
REVNPDLLRLARTENTRTYNPRDRRRGKMVREADRERERRQRSRIWTPGRPEVIERLDAE
GLLPAITFIFSRAGCEAAVQQCLYAGLRLNDDEARLRVREIVEARTAAIPTEDLHVLGYY
EWLEALERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARTVILEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGLDPDHLAGLAGTRTYPLRSS
FKPSYNMAVNLVEGFGRHRSRELLETSFAQFQADRSVVGISRQVQRNEEGLEGYREGMTC
HLGDFEEYARLRRDLKDRETELARQGAAQRRAQAASSLEKLKPGDVIHVPTGKFAGLALV
LDPGIPAGRTNGHRGFEHHDGPRPLVLTAERQVKRLASIDFPVPVEALERMRIPKSFNPR
SPQSRRDLASALRSKAGHINPERHHRQRSAAADDREIARLRTELRAHPCHGCDEREDHAR
WAERYHRLQRDTQQLERRIEGRTNTIARTFDRIVALLTELDYLRGDEVTDNGKRLARLYG
ELDLLASECLRDRVWEGLTPAELAACVSALVFEARQADDAVAPKLPTGNAKAALGEMVRI
WGRLDALEEEFKINQAEGVGQREPDLGFAWAAYQWASDKSLDEVLREAEMPAGDFVRWCK
QVIDVLGQIAAAAPKENSTVAKNARKAVDALLRGVVAYSSVG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctcacaccagccgaggcgtacgcggccgcccgcgcccgcaacgccgag
caggccaccgcactggcacccttccgcgagctgtacgagttcggtctggaccccttccag
atcgaggcctgccaggcactcgaagcgggaaagggcgtgctcgtcgccgcgcccacgggc
tccggcaagaccatcgtcggcgagttcgccgtccacctcgccctcacccagggccgcaag
tgcttctacacgacccccatcaaggcgctgtcgaaccagaagtacgccgacctcgtcaag
cggtacggcgccgacaaggtcggcctgctcaccggtgacaacagcgtcaacggcgacgct
ccgatcgtcgtcatgaccaccgaagtcctccgcaacatgctctacgcgggctcccaggcc
ctctccggcctcgggtacgtcgtgatggacgaggtccactacctctccgaccgcttccgc
ggcgccgtctgggaggaagtgatcatccacctccccgaatccgtcacgctggtctcactc
tccgcgaccgtgtccaacgccgaggagttcggcgactggctcgacaccgtccgcggcgac
accgaggtcatcgtctcggagagccggcccgtgcccctctggcagcacgtcctcgccggg
cgccggatgtacgacctcttcgaggaggagaccgaccacggaggccgcggcgcgtcccgg
cgcgaggtcaaccccgacctcctccgcctcgcccgcaccgagaacacgcgcacgtacaac
ccgcgcgaccggcggcgcggcaagatggtccgcgaggcggaccgcgagcgcgagcgccgc
cagcgctcccggatctggacccccggccgccccgaggtcatcgagcgtctcgacgccgaa
gggctcctgcccgccatcaccttcatcttcagccgcgccggctgcgaggccgccgtccag
cagtgcctctacgccggactccggctcaacgacgacgaggcacgcctgcgcgtccgcgag
atcgtcgaggcgcgcacggccgcgatccccaccgaggacctccacgtcctcggctactac
gagtggctcgaagccctggagcggggcatcgccgcccaccacgccggcatgctcccgacc
ttcaaggaggtcgtcgaggagctcttcgtccgcggcctcgtgaaggccgtcttcgccacc
gagaccctcgccctcggcatcaacatgcccgcgcgcaccgtcatcctcgagaagctcgtc
aagtggaacggcgagcagcacgcggacatcacccctggcgagtacacccagctcaccggc
cgcgccggccgccgcggcatcgacgtcgagggccacgccgtcgtgctctggcagcgcgga
ctcgacccggaccacctcgccgggctcgccggcacgcgcacgtacccgctgcgctccagc
ttcaagccctcgtacaacatggcggtcaacctcgtcgaaggctttggcaggcaccgctcc
cgcgagctcctggagacctccttcgcccagttccaggccgaccgctccgtcgtgggcatc
tcgcgccaggtccagcggaacgaggaggggctggagggctaccgcgagggcatgacctgc
cacctcggagacttcgaggagtacgcgcggctccgccgcgacctcaaggaccgcgagacc
gaactggcccggcagggcgccgcgcagcgccgcgcccaggccgcgagctcgctggagaag
ctcaagcccggcgacgtcatccacgtccccaccggcaagttcgcgggcctggccctcgtc
ctcgacccgggcatcccggccggccgcaccaacggccaccggggcttcgagcaccacgac
gggccgcgccccctcgtcctcaccgccgagcggcaggtcaagaggctcgcctccatcgac
ttcccggtcccggtcgaggcgctggagcggatgaggatccccaagtccttcaacccgcgc
tccccgcagtcccgccgcgacctcgcctccgccctgcggagcaaggccgggcacatcaac
cccgagcgtcaccaccggcagcgctccgccgccgccgacgaccgggagatcgcccggctg
cgcaccgaactccgcgcgcacccctgccacggctgcgacgagcgcgaggaccacgcccgc
tgggccgagcgctaccaccgtctccagcgcgacacccagcagctggagcggcgcatcgag
ggccgtaccaacaccatcgcccgcaccttcgaccggatcgtcgcgctcctcaccgagctc
gactatctgcgcggcgacgaggtcacggacaacggcaagcgactcgcccggctctacggc
gaactcgacctgctggcgagcgagtgcctccgcgaccgtgtctgggagggcctcaccccg
gccgaactcgccgcctgcgtctcggcgttggtgttcgaggcgaggcaggccgacgacgcc
gtcgcgcccaagctgcccacgggcaacgccaaggcggcgctcggcgagatggtccggatc
tggggccgtctcgatgcgctcgaagaggagttcaagatcaatcaggcggagggcgtcggc
cagcgcgagcccgacctcggcttcgcctgggccgcctaccagtgggcctccgacaagagc
ctcgacgaggtgctccgcgaggcggagatgcccgcgggcgacttcgtccgctggtgcaag
caggtgatcgacgtcctcgggcagatcgcggccgcggcgcccaaggagaacagcaccgtc
gcgaagaacgcccgcaaggccgtggacgcgctgctgcgcggcgtcgtcgcctacagctcg
gtgggctga
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