Streptomyces tanashiensis: LDH80_37235
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Entry
LDH80_37235 CDS
T08718
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
staa
Streptomyces tanashiensis
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staa03400
]
LDH80_37235
Enzymes [BR:
staa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LDH80_37235
DNA repair and recombination proteins [BR:
staa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LDH80_37235
Prokaryotic type
LDH80_37235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZX25992
LinkDB
All DBs
Position
8221340..8222713
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AA seq
457 aa
AA seq
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MSVSVVLFTSDLRVHDHPPLRAAVEGAHEVVPLFIRDPAVDRAGFAAPNRLAFLADCLAD
LDRELQDRGGRLVVRGGDTVAEVCAVVRQAQADEVHVAAGCSAFAQARQERLRRALEADG
CRFYVHDAVITAVPPGDLTPQGSDHYAMFTPFYRRWCAEPLRKPFMAPRDVKVPHTVRSE
DLPARSAVEGASPGLAAGGESEGRRRLSSWLSRHVDSYGEGHDDLAGDATSRLSPYLHFG
AVSPVEAVQRARARGGAGAEAFIRQLCWRDFFHQVLAARPEAAAEEYRSRRDDWRRDEDA
EADLQAWREGRTGYPIVDAAMRQLAHEGWMHNRGRLVTASFLTKTLYIDWREGARHFLSL
LVDGDVANNQLNWQWMAGTGNDTRPNRVLNPVRQGLRYDPDGRFVRRWVPELDGLQAPAV
HEPWTLTGLDRARYDYPDPLIVLADGLARFRQAREAG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttccgtggtcttgttcacttcggacctcagggtgcatgatcatccgcccttg
cgggccgccgtggagggcgcgcacgaggtcgttccgctgttcatccgggatcccgccgtc
gaccgggcgggtttcgcggcccccaacagactggcctttctcgcggactgcctcgccgat
ctggaccgggagctccaggacaggggcggtcggctcgtggtgcgcggcggtgacacggtc
gccgaggtgtgcgcggtggtccggcaggcccaggccgacgaggtgcatgtcgcggcaggc
tgctccgccttcgcccaggcacggcaggagcggctgcggcgcgcgctggaggcggacggc
tgccgcttctacgtgcacgatgcggtgatcacggccgtgccgcccggtgatctcactccg
cagggctccgaccactacgccatgttcacccccttctaccggcgttggtgtgccgaaccc
ctgcgcaagccgttcatggctccccgcgacgtgaaggtgccgcacaccgtgcgttccgag
gaccttcccgcacgctccgcggtggagggagcgtccccggggctggctgcgggaggcgag
agcgaggggcgcagacggctctcgtcctggctgtcgcggcacgtcgactcctacggcgaa
gggcatgacgacctcgccggcgacgcgacgtcgcggctctcgccctatctgcacttcggg
gcggtctcgcccgtcgaggcggtgcagcgagcgcgagcgcgcggtggagcgggagccgag
gcgttcatccggcagctgtgctggcgcgacttcttccatcaggtgctggccgcccgcccc
gaggcggcggcggaggagtaccgctcccggcgcgacgactggcggcgggacgaggacgcg
gaggctgatctccaggcgtggcgcgagggacgaaccggctacccgatcgtggacgcggcc
atgcggcagctcgcccatgagggatggatgcacaaccgggggcgcctcgtcactgcctcg
ttcctgaccaagaccctgtacatcgactggcgtgagggcgcccgccacttcctcagtctc
ctggtggacggcgatgtggcgaacaaccagctgaactggcagtggatggcgggcacgggc
aacgacacgcgacccaaccgcgtcctcaacccggtgcggcagggacttcgctacgacccg
gacggccgcttcgtccgccggtgggtcccggagctcgacggcctgcaggcgcccgccgtg
cacgagccgtggacgctcaccggcttggaccgcgcccggtacgactatcccgatcccctc
atcgtgcttgcggacggcctggcgcgttttcgtcaggcccgggaagccggctga
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