| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
stab Spiroplasma tabanidicola
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:stab00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STABA_v1c01270 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:stab03021]
STABA_v1c01270 (rpoC)
03400 DNA repair and recombination proteins [BR:stab03400]
STABA_v1c01270 (rpoC)
Enzymes [BR:stab01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STABA_v1c01270 (rpoC)
Transcription machinery [BR:stab03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STABA_v1c01270 (rpoC)
DNA repair and recombination proteins [BR:stab03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STABA_v1c01270 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
130787..134545
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| AA seq |
1252 aa
MAGNKRMIKIELTSPEVIKKWSRGEVTKPETINYKTLKTEKEGLFDERIFGPTKNYECSC
GKYKKVKNKGKVCERCLVEITETIVRRERMGHIELEEPVTHIWMLKVAPSRIASILDLKT
KEVEEVVYFVSHIVLDPGTSKHLKRGQVLDLGNAKASLKTRQQLVKTLEDIRTELTPDTF
PWKRAESLLEQLKSTSTPFSMDEAATFISRHIGAKFGIGASAIEELLKGIDLDSEIEKIK
EDLKERKGSSEQNKMMKRLEILDSLKKSNSRPEWMVLHVIPVIPPDIRPIIQLDGGRFTT
SEINDLYRRIIIRNERLKKVKAMGAPSIIVNNEKRMLQEAVDALLDNERKPRPVTGKDKR
ALKSLTSILKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPRDMAITLFKPFVI
RRLQEKDYAENVKVAEKMILANDSKVWDVLEEVIKDRPVLLNRAPTLHRLGIQAFEPKLV
KGKAIRLHPLVTTAFNADFDGDQMAVHLPISDEAVAEARALMLGSKAILGPKDGKPIVTP
TQDMILGNYYISTEEKSSADVEIKGEGTVFSSYEEVKIAYETESVSLSAIIAIPVSALSD
KPFDKEDQDKYLITNVGKIFFNQMFDEKFAWVVNSNIWDAEKEIKKFLVPEGTNIREYIQ
NDYEIQQPIKKKELSLIIEKYFKTYGAQKTARMLDNMKDLGFHFSSKSGTTISAADVVAF
EEKHDEFKIADEKVHQITEFYNMGMLTKAEKKRRVISIWSSVKDSIQSRLESVLKRDPKN
PVFVMADSGARGNVSNFTQLVGMRGLMNDPKGDIKEIPIKSSFREGLTVSEYFISTHGAR
KGMADVALKTADSGYLTRRLVDISQEIIVTQDDCNGSKGFNVYSIIDTKHNNIIVPLKDR
LVGRYSFEDVTFEGKVLVEANTLFTGELADKVINAGITDVQIRTVLNCEAARGVCRKCYG
VNLATGNEVALGEPVGVVAAQSIGEPGTQLTMRTFHTGGVAGGADITQGLPRIKELLDVT
TPKGSIALISQIDGVVKEVIEEDQILTIVVESDNDERKYKSQYGAISRVNVGDKVRRGKK
LTEGAINIKELLEVAKIEDVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKIIDS
GDSSLLPGEIISEKTFKDEVLKSIQVGKKPPLAKFVIFGIKKAPLESDSWLSSASFQDTA
RVLVKAVIKGKVDKLEGLKENIMLGNLIPAGTGLTGSEDIIRKGKETLESEY |
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| NT seq |
3759 nt +upstreamnt +downstreamnt
atggcaggaaataaacgtatgatcaaaattgaactaacttctcctgaagttattaaaaaa
tgatctcgtggtgaagtaacaaaaccagaaactataaactacaaaactttaaaaacagaa
aaagagggactatttgatgaaagaatctttggtcctactaaaaactatgaatgtagttgt
gggaaatataaaaaagtaaaaaacaaaggtaaagtttgtgaacgttgtttagtagaaatt
actgaaacaattgtgcgtcgtgaaagaatggggcacattgagcttgaagaaccagtaact
catatttgaatgttaaaagttgcaccttcaagaatagcttcgattttagatttaaaaact
aaggaagttgaagaagtggtttactttgtaagtcacattgttttagacccaggaacttca
aaacatttaaaaagaggacaagttcttgatttaggaaatgcgaaagcaagtttaaaaact
agacaacaattagttaaaactttagaagatattagaacagaattaactcctgatacgttt
ccttgaaaaagagcagaatcattattagaacaattaaaatcaacttcaactccattctca
atggatgaagcagcaacatttatttcaagacatattggtgcaaaattcggaattggtgca
agtgctattgaagaattattaaaaggaattgatttagattcagaaattgaaaaaattaaa
gaagatctaaaagaacgtaaaggttcatcagaacaaaacaaaatgatgaaacgtttagag
attttagactcattaaaaaaatcaaattcacgtccagagtgaatggtattacatgtaata
ccagtcatacctccagacattagaccaattattcaattggatgggggaagatttacaacc
tctgaaattaatgatttatatagaagaattataattagaaatgaacgtctaaaaaaagtt
aaagctatgggagcgccaagtatcattgttaacaacgaaaaacgtatgttacaagaagct
gttgatgctttattagataatgaacgtaagccaagaccagttacaggaaaagataaacgt
gctttaaaatctttaacttcaattttaaaaggaaaacaaggaagatttcgtcaaaacctt
ttaggaaaacgtgttgactattcaggtcgttcagttattgcgattggaccagatctaaaa
atgtatcaagcaggaattcctagagatatggcaattactttattcaaaccttttgtaatt
agaagattacaagaaaaagactatgcagaaaatgttaaagttgctgaaaaaatgatttta
gcaaatgattcaaaagtttgagatgttttagaagaagttattaaagatagaccggttctt
ttaaaccgtgctccaactcttcaccgtttaggaattcaagcatttgaaccaaaacttgtt
aagggaaaagctattcgtttacacccacttgttactacagctttcaatgctgactttgat
ggagaccaaatggctgtccacttaccaattagtgatgaagcggttgcggaagcaagagcg
ttgatgttaggaagtaaagcaattttaggaccaaaagatggtaaaccaattgttactcct
actcaggatatgattttaggaaactattatatttcaacagaagaaaaatcatctgctgat
gttgaaattaaaggtgaaggaactgtcttttcaagctatgaagaagttaaaattgcttat
gaaacagaatcagtttcattaagtgcaattattgctattccagttagtgcattaagcgat
aaaccttttgataaagaagatcaagataaatacttaattactaatgttggtaaaatcttt
tttaaccaaatgtttgatgaaaaatttgcttgagtagtaaatagtaatatttgagatgct
gaaaaagaaattaaaaaattcttagttccagaaggaacaaatataagagaatatattcaa
aatgactatgaaatccaacaaccaatcaagaaaaaagaattatctttgattatcgaaaaa
tactttaaaacttatggagcgcaaaaaactgcaagaatgctagataatatgaaagattta
ggattccactttagttcaaaatcaggaactacaattagtgcagctgatgttgttgctttt
gaagaaaaacatgatgaattcaaaattgcagatgaaaaagtacatcaaattacagagttc
tataatatgggaatgcttacaaaagctgaaaaaaaacgtcgtgtaattagtatttgatca
agtgtaaaagacagtattcaatcaagattagaatcagttctaaaaagagatccaaaaaac
ccagtatttgttatggccgactctggagctcgtggtaacgtatcaaactttactcaactt
gtaggtatgagaggacttatgaatgaccctaaaggggacattaaagaaatcccaattaag
tcttcatttagagaaggattaactgtgtctgaatactttatttctactcacggagctaga
aaaggtatggctgatgttgccttaaaaactgctgactcaggttatctaacaaggagactt
gtagatatttctcaagaaattatagttactcaagatgattgtaatggatcaaaaggattt
aatgtttattcaattattgatacaaaacacaacaatataatagtacctttaaaagataga
cttgtaggacgatactcatttgaagatgtaacttttgaaggaaaagttttagttgaagcc
aatacattatttacaggtgaacttgctgataaagttattaatgcaggaattactgatgtt
caaattagaactgtattaaattgcgaagctgctcgtggagtgtgtagaaaatgttatggg
gttaacttagcaactggaaatgaagttgctttaggagaaccagttggagttgtagctgca
caatcaattggagaaccaggaactcagttaactatgcgtacattccataccggaggggtt
gctggtggagcagacataactcaaggacttcctcgtataaaagaattacttgacgttaca
acaccaaaaggatcaattgctttaatctctcaaattgatggagttgtaaaagaagtaatt
gaagaagatcagattcttacaattgttgttgaatcagataacgatgaaagaaaatacaaa
tctcaatatggagcaatttctagggttaatgttggagacaaagtaagacgtggtaaaaaa
cttactgaaggtgctatcaatattaaagaattactagaggttgcaaaaattgaagatgta
caaaactacattttaaaagaagtccaaaaagtttatcgtttacaagggattgaaatttca
gataaatatattgaaatcattgttaaacaaatgttaaacaaagtaaagattattgattcg
ggtgattcatcattattacctggagaaataatttctgaaaaaactttcaaagatgaagtt
ttaaaatcaattcaagttggaaaaaaaccaccacttgcaaaatttgtaatctttggtatt
aaaaaggcaccactagaatcagattcatgattatcaagtgcttcattccaagatacagca
agagttcttgttaaggctgttataaaaggaaaagtagataaattagaaggattaaaagaa
aacattatgttaggaaacttaatccctgctggaactggattaacaggatctgaagatatt
atcagaaaaggtaaagaaactttagaatcagaatattaa |
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