Spiroplasma tabanidicola: STABA_v1c03680
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Entry
STABA_v1c03680 CDS
T06336
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stab
Spiroplasma tabanidicola
Pathway
stab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STABA_v1c03680 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stab03019
]
STABA_v1c03680 (rny)
Messenger RNA biogenesis [BR:
stab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STABA_v1c03680 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KH_KhpA-B
HD_4
MFS_Mycoplasma
GAIN
KH_2
KH_NusA_2nd
dUTPase
Motif
Other DBs
NCBI-ProteinID:
QGS51731
UniProt:
A0A6I6C9Z6
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Position
418908..420434
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AA seq
508 aa
AA seq
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MTNSERNSWLIVVTALAIAVFLLILLSCYLLFNRRRSHVLKKAKDEAKKIKMEAIAAAKI
EATILKNSIEEELFSKRAEIEHESALLEQKKIKYFDDLENLNLRESKIVEQQLENNRVKN
KLSVDVDNVVEILEKLADMSSEEAKERLLIYAESTYIEDIYKEIKTKEEFIRKNSREIVL
NIIMEAMEKSHVQIATEKNTTIFKLEDDSWKGKIIGREGRNVKTFQQYGGVDIIIDEVPN
RIVISSFNPLRREIAYNTLTELIKIGRLQPAAIEETLISEEQKIQETFFKTGNQVTKDLN
IFDLDEEIILNLGKLKYRFSYGQSVLQHSIEVAKIAKSLANALELDEQIALKAGLLHDIG
KAMDFEQEGSHVELGSNLLKMHKIDNIIVNCVESHHGDVEKKSVYAEIISIADTISAARF
GARNNGAEQFFERLKEVETECEKFYGVLKAYVFQSGRQIRVIVNPDIIQDHEMLNLTQQI
KEKIKSINKTPGDIYITLIREKRESTKL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgactaattcagaaagaaactcatgacttatagttgtgacagcacttgcgattgcagtg
tttttactaatattgcttagttgctacttgttgttcaaccgtcgtagaagtcatgtgcta
aaaaaagcgaaagacgaagcaaaaaaaataaaaatggaagcaattgctgctgctaagatt
gaagcgactattttaaaaaactcgattgaagaagaacttttttctaaaagagcagaaata
gaacatgaatctgctttattagaacaaaaaaagataaaatactttgatgatttagaaaat
ttaaacctaagagaatctaaaattgttgaacaacaactagaaaataatagggttaaaaat
aagttatcagttgatgttgataatgttgtagaaattttagaaaaactagctgatatgtca
tcagaagaagcgaaagaaagattattaatatatgcagaaagtacatatattgaagatata
tataaagaaataaaaacaaaagaagagtttattaggaaaaactcaagagagattgtttta
aacattattatggaagctatggaaaaatcgcatgttcaaatagctactgaaaaaaacaca
actatttttaaactcgaagatgattcgtgaaaaggaaaaattattggtagagaaggtagg
aatgtaaaaacatttcaacaatatggcggagttgacattataattgatgaagttccaaat
agaatagttatatcttcatttaaccctttaagaagagaaattgcatataatactttaaca
gaattaataaaaataggtagattacaacctgctgctatcgaagaaactttgataagtgaa
gagcaaaaaatacaagaaacattttttaaaactggtaatcaagttacaaaagatttaaac
atatttgatttagatgaagaaataattttaaatttaggaaaattgaaatatcgttttagt
tatggacaaagtgttttacaacattcgattgaggttgcaaaaattgcaaaatcacttgct
aatgcattagaattagatgaacaaatcgcccttaaagcaggattattacacgatattggt
aaggctatggattttgaacaagaaggtagtcatgttgaattagggtcaaatcttttaaaa
atgcataaaattgataatataatcgttaattgtgtagaatctcatcacggagatgtggaa
aaaaaatctgtttatgcagaaataatttcaattgcagatacaataagtgctgcaagattt
ggggcaagaaataatggagcagaacaattctttgaaagattaaaagaagtagaaactgaa
tgtgaaaaattttatggtgttttaaaagcttatgtttttcaatcaggaagacaaattaga
gttatagtaaatcctgacattattcaagatcatgaaatgcttaatttaactcaacagatt
aaagaaaaaataaaaagtattaataaaactccaggagatatttatataactttaattaga
gaaaaaagagaatctacaaaattatag
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