Spiroplasma tabanidicola: STABA_v1c04780
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Entry
STABA_v1c04780 CDS
T06336
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stab
Spiroplasma tabanidicola
Brite
KEGG Orthology (KO) [BR:
stab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stab03016
]
STABA_v1c04780 (truB)
Enzymes [BR:
stab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STABA_v1c04780 (truB)
Transfer RNA biogenesis [BR:
stab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STABA_v1c04780 (truB)
Prokaryotic type
STABA_v1c04780 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DIM1
Motif
Other DBs
NCBI-ProteinID:
QGS51841
UniProt:
A0A6I6CA99
LinkDB
All DBs
Position
541024..541935
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AA seq
303 aa
AA seq
DB search
MNNESGIFLVNKPLNITSNDLIQKIKKKFNIKKIGHAGTLDPIATGLMVVLTNQATKISN
YLLKADKVYVVEMKLFQKTDSGDITGKVIETQEFKKIAKKDVETLAQKYNGYIYDQYPPI
YSAIKVNGKKLYEYARNDQEVKIEPRKVTINECEVIDFNQKNATIKLKVNCSKGTYIRSF
VQDFAKELDCISTVSSLERVASGNFNLDQAKTIEKIEESDLITMYDGLIQNNHTLIEYHK
SRDIIQGRAITLTGRSDKVIFIIDDKKNVIAIYKWVAKDLYTCQRGLWDEDFEASLTEAE
RDF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaatcgggtatttttttagttaataaacctctaaacataacttcaaatgat
ttaattcaaaagataaaaaagaaatttaatataaaaaaaattggtcatgcagggacgtta
gatccaattgctactggtttaatggttgttttaacaaatcaagctactaaaatttctaat
tatcttttaaaagcagataaagtgtatgttgttgaaatgaaattatttcaaaaaacagat
agtggtgatataactggaaaagtaattgaaacacaagaatttaaaaaaatagcaaaaaaa
gatgtagaaacattagcacaaaaatataatggttatatttatgatcaatatcctccaatt
tattctgcaattaaagtaaatggaaaaaaattatatgaatatgcaagaaatgatcaagaa
gtaaaaattgaaccaagaaaagtaacgattaatgaatgtgaagttattgattttaaccaa
aaaaatgccactattaaattaaaagtaaattgtagtaaaggtacttatattcgtagtttt
gttcaagattttgcaaaagaattagattgtatttcaactgttagttctttagaaagagtt
gcttctggtaattttaatttagatcaagcaaaaacaattgaaaaaattgaagaaagtgat
ttaataacaatgtatgatggattaattcaaaataatcatactttgattgagtatcacaaa
agtagagatataattcaaggaagagcaatcacattaactggtagaagtgataaagtcatt
tttataattgatgataaaaaaaatgttattgcaatctataaatgagttgcaaaagattta
tatacatgtcaacgtggtttatgagatgaagactttgaagctagtttaacagaagcagaa
agagatttttaa
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