Spiroplasma tabanidicola: STABA_v1c05060
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Entry
STABA_v1c05060 CDS
T06336
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
stab
Spiroplasma tabanidicola
Brite
KEGG Orthology (KO) [BR:
stab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stab03019
]
STABA_v1c05060 (cshB)
03009 Ribosome biogenesis [BR:
stab03009
]
STABA_v1c05060 (cshB)
Enzymes [BR:
stab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STABA_v1c05060 (cshB)
Messenger RNA biogenesis [BR:
stab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STABA_v1c05060 (cshB)
Ribosome biogenesis [BR:
stab03009
]
Prokaryotic type
rRNA helicases
STABA_v1c05060 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
PhoH
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QGS51869
UniProt:
A0A6I6C8S9
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All DBs
Position
572487..573848
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AA seq
453 aa
AA seq
DB search
MKFSDFGFKKFINDALDEKGFKEPTSIQKKVIPLLKKHKSVIAQSHTGTGKTHAFLLPIL
NNLDYEVNKVQALIITPTRELARQIFANTKEMLKHNNKATVAFFVGGEAFEKQASSLKNK
QPMIVIGTPTKLKSLYESNLLQLTTTNYVVIDECDMIFDLGFIDDLDYMLAKMNNDTNIS
LFSATIANGLKPFLTKYLSKSIFIENIDKKPTNENIEHILIWTKNKENKEVLKLIVESIN
PYIVIVFVNKKDQVKEVIGWLKDFGIKNIGELHGDLDPRQRSIMQKRIQNMEFRWIVASD
IAARGIDIDGVSHVVSIDLPKDLEYYIHRSGRTGRNQYLGKSYVLFNSTNQHLIDTLKSK
KIEFKNMKLANNQLVDIIERKKNKVINPNNPGVLEEQKIINRFKKQPIKPGYKKKRKLEI
EKVKKDIRRKHIKESIAKIKKAKYKKRREELFD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgattttgggtttaaaaagtttataaatgatgctttagatgaaaaggga
tttaaagagccaacaagtatacaaaaaaaggtaatacctttattaaaaaagcataaaagc
gttattgctcaatctcacactggtactggaaaaacacatgcatttttattaccaatttta
aataacttagattatgaagtaaataaagtacaagctttaataataaccccaacaagagaa
cttgcaagacaaatatttgcaaatacaaaagaaatgttaaaacataataataaagcaact
gttgctttttttgttggtggagaagcttttgaaaaacaagcatcttcattaaaaaataag
caaccaatgattgtaattggaacaccaaccaaattaaaaagcctatatgaaagcaatcta
ttacaattaacaacaacaaactatgttgtaatcgatgaatgtgatatgatttttgatctt
ggttttattgatgatcttgattatatgcttgcaaaaatgaataatgatacaaatattagt
ttattttcagcaacaattgcaaatggattaaaaccatttttaactaagtatttgtcaaaa
tctattttcattgaaaatattgataaaaaaccaacaaatgaaaatattgaacacatttta
atttgaactaaaaacaaagaaaataaagaagttttaaaattaattgtagaatcaataaat
ccttatattgttatagtttttgttaataaaaaagatcaagtaaaagaagtgattggttga
ttaaaagattttggtataaaaaatattggagagcttcatggtgatttagatccaagacaa
agatcaataatgcaaaaaagaattcaaaatatggaatttagatgaattgttgctagcgat
attgctgctagaggaattgatattgatggagtaagccatgtagtttcaattgatttgcca
aaagatttagaatattatattcatagaagtggaagaacaggtagaaatcaatatttagga
aaaagttatgttctttttaactcaacaaatcaacatctaattgatactttaaaatctaaa
aaaatagagtttaaaaatatgaaattagcaaataatcaattagttgatatcattgaaaga
aaaaaaaataaagttataaatcctaataatccaggggttttagaagaacaaaaaataata
aatcgttttaaaaaacaacctataaaacctggttataagaaaaaaagaaaattagagatt
gaaaaagttaaaaaagatataaggagaaaacacattaaagagtcaatagcaaaaattaaa
aaagctaagtataaaaaaagaagagaagagttatttgattaa
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